Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2144 ATGACAGAGAGGCCAACGAGGAAGAGAAAAATGGGAGACACAAAGGAGAGAGCTACGAAGAAACCCGCGGCAAAATGGCCTCTCATCAAACCCAAAAAGAATCTTCAGATTAGCCGCCTCCGAGATTTCGATCTCTTCACGGTCCAGAATTTTTTCTCCTCCGCTGAATCAAAGGCATTCGTTAAAATTGCTGAAGAAATTGGTTTTACTCATCAGGGGAGTCTAGGTCCAACTTATGGCGAAGCATTCAGAGATAATGATCGAATGTTGGTGGATGATCCTGTCCTTGCAGATACTATTTGGGAGTCTGGACTTAGCAAACTATTTTCTGATATTAAAATTCGAGGAAAGGTTGCTGTAGGCCTCAATCCAAATATTAGATTCTATAGGTACAAGGTTGGTCAGCGCTTTGGACGGCATATTGATGAAAGTGTTGATCTTGGAGATGGAAAACGCACTTATTATACTCTGCTAGTGTATTTGAGTGGTGGGCCTGGTGAACTTAAATCAAAGCCCAAAAATGATTCCAGCAATCCCTCAGTTTCATCTGTTGATCCTTTAGTTGGAGGAGAAACAGTGTTTTATGGTCAAAGAAACAAAACTGTGGCTGAGGTGGCTCCTACTGAAGGGACAGCCCTACTGCACCTTCATGGAGATAAATGTTTGTTGCATGAAGCCAGAAATGTTACCAAGGGTGTCAAGTACGTGTTTCGTTCAGATGTAGTATTTGCATGA 735 0.4259 MTERPTRKRKMGDTKERATKKPAAKWPLIKPKKNLQISRLRDFDLFTVQNFFSSAESKAFVKIAEEIGFTHQGSLGPTYGEAFRDNDRMLVDDPVLADTIWESGLSKLFSDIKIRGKVAVGLNPNIRFYRYKVGQRFGRHIDESVDLGDGKRTYYTLLVYLSGGPGELKSKPKNDSSNPSVSSVDPLVGGETVFYGQRNKTVAEVAPTEGTALLHLHGDKCLLHEARNVTKGVKYVFRSDVVFA* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2144 244 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 11 244 - -
Gso10g2144 244 MobiDBLite consensus disorder prediction 1 25 - -
Gso10g2144 244 SMART p4hc 43 242 IPR006620 GO:0005506|GO:0016705|GO:0031418
Gso10g2144 244 Gene3D q2cbj1_9rhob like domain 33 239 - -
Gso10g2144 244 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 11 244 IPR045054 -
Gso10g2144 244 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 121 244 IPR005123 -
Gso10g2144 244 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2144 Gso-Chr10 48466006 48468043 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2144 - - gmx:100526938 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2144 10 48466006 48468043 Gso10g2144 10 48466006 48468043 ECH
Gso20g1237 20 42394220 42394855 Gso10g2144 10 48466006 48468043 GST