Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2132 ATGTGTCATATAAGTTCCCACCTCCCCTGCAAATGCAACTCAATGAAATCCCAAGAGGCAGAGGAATCCGACATGAAGATCACTAACCCCTTGATCCAAAAGGACATAACAGTAACACCACCCCATCATCATGTCTTGAAAGAACTCATTTCCATATCCAAGATAGCCCTCCCCATGATCCTCACCGGTCTCTTGCTCTACTGCCGTTCCATGATCTCCATGCTCTTCCTCGGCCGCCTCGGCGAGCTGGCCTTAGCCGGCGGCTCACTCGCCGTCGGCTTCGCCAACATCACCGGTTACTCGATCCTCTCCGGCCTCGCTGTCGGAATGGAACCCTTTTGCGGACAAGCCTACGGTGCCAAAAAGTTCACCCTCCTCGGCCTCTGCTTACAAAGAACCATTCTTTTGCTCCTCTTCACTTCCATTCCAATCTCTCTCCTTTGGCTCTACATGAAGCATATCCTTCTTTTATGTGGCCAGGACGAGGCCATAGCCACACAAGCCCAATCATATCTTCTTTATTCCATCCCTGACCTCTTAGCACAATCTTTTTTACACCCTTTAAGAATTTACCTTCGAAGCCAATCCATTACTCTGCCTCTCACTCTCTGCGCCACTTTCTCAATTCTCCTTCACATCCCCATTAACTACCTTCTTGTTTCCCACCTCAATTGGGGAATCAAAGGCGTGGCTCTCAGCGGGGTTTGGACTAACTTCAACCTCATAGCTTCTTTGATTCTTTACATAGTCTTCTCTGGTACGCATAAGAAAACATGGGGAGGTTTTTCTTTTGAGTGTTTCACGCAATGGAAATCGCTCCTCGACTTGGCTATCCCAAGCTGCATTTCCGTGTGCCTAGAATGGTGGTGGTATGAGATCATGATTTTGTTATGCGGGTTGTTGGTGAATCCTAGAGCAACCGTGGCTTCCATGGGGATTTTGATCCAAACCACTTCTCTGCTCTACATTCTCCCATCGTCAATAAGCTTCAGCGTGTCCACAAGAGTTGGTAACAAATTAGGTGCTCAAAAGCCCTCAAAGGCTAAACTTTCTGCCATAGTTGGCCTCTCTTGCAGCTTCATGTTAGGTTTTTTAGCTTTTGTTTTCACCATTCTGGTTAGGAACATTTGGGCCAGCATGTTCACACAAGACAAGGAAATAATAACCTTGACCTCATTGGTGTTACCGATTATAGGACTCTGCGAACTCGGAAACTGTCCTCAAACAACGGGGTGCGGAGTGCTAAGAGGCACAGCAAGGCCTAAAGTTGGTGCTAACATTAACTTAGGTTGTTTCTACCTTGTTGGAATGCCTGTGGCGGTTTGGCTTGGTTTCTTCGCAGGGCTTGATTTTCAAGGGTTGTGGCTTGGGTTACTTGCGGCTCAGGGGTCTTGTGCAGTGACCATGTTGGTGGTTATGAGTCAAACGGATTGGGATGTTGAGGCTCTAAGGGCAAAGAAACTAACCAGTGTTGTTGTTGCTGTTGATGACAGCAAGGAGGTTGGTGCAGAGAAGCCACCCAAAGCTGAAATCAAGGAAGATTCTTTATTATCATTAGCTGATTCAGAAGAAGATAAACAATCGTGGGTTTAA 1593 0.4696 MCHISSHLPCKCNSMKSQEAEESDMKITNPLIQKDITVTPPHHHVLKELISISKIALPMILTGLLLYCRSMISMLFLGRLGELALAGGSLAVGFANITGYSILSGLAVGMEPFCGQAYGAKKFTLLGLCLQRTILLLLFTSIPISLLWLYMKHILLLCGQDEAIATQAQSYLLYSIPDLLAQSFLHPLRIYLRSQSITLPLTLCATFSILLHIPINYLLVSHLNWGIKGVALSGVWTNFNLIASLILYIVFSGTHKKTWGGFSFECFTQWKSLLDLAIPSCISVCLEWWWYEIMILLCGLLVNPRATVASMGILIQTTSLLYILPSSISFSVSTRVGNKLGAQKPSKAKLSAIVGLSCSFMLGFLAFVFTILVRNIWASMFTQDKEIITLTSLVLPIIGLCELGNCPQTTGCGVLRGTARPKVGANINLGCFYLVGMPVAVWLGFFAGLDFQGLWLGLLAAQGSCAVTMLVVMSQTDWDVEALRAKKLTSVVVAVDDSKEVGAEKPPKAEIKEDSLLSLADSEEDKQSWV* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2132 530 PANTHER MULTIDRUG RESISTANCE PROTEIN 31 501 - -
Gso10g2132 530 PANTHER PROTEIN DETOXIFICATION 31 501 - -
Gso10g2132 530 CDD MATE_eukaryotic 48 482 IPR045069 GO:0042910|GO:1990961
Gso10g2132 530 TIGRFAM matE: MATE efflux family protein 58 455 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso10g2132 530 MobiDBLite consensus disorder prediction 501 530 - -
Gso10g2132 530 Pfam MatE 279 442 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso10g2132 530 Pfam MatE 58 218 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2132 Gso-Chr10 48333213 48335132 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2132 K03327 - gmx:100813022 1026.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2132 10 48333213 48335132 Gso10g2132 10 48333213 48335132 ECH