Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2113 ATGGAAGACAACGACTACATAAGGAGATGGGAGGATCTGGACATAGATATTTTGGTGAAGATTTTTCAGTTGCTTGACATTTTTGAGTTGACATCCGGCATCTCTCGTGTTTGTAGTGCATGGCGCTTGGCATGTTGTGATCCACTTCTCTGGAAAACACTAGATTTGTCGATGTTAAGATCTAACTTCATCAAGATCCCATTAGAGCCATTTGTTTATGTTGATGGACGATCTGATAGGACATTAACGCGTATATTGAAGATTTCCCTGAGTCTCAGCCAGCAGAGTATAATGACTTTGATCTTCCATTTCAACTTGTACGTAAGTGATGAACAGTTGACATACACTGCTGAAAGGTGCCCACAGCTCAGGCGACTCGTTCTGCCAGCTTGGAACAGAATCAAGAAACCAGGAATGTGCAAAGCCATTCGTGGCTGGAAAGAGTTAGAGTCCCTGACAATGCCTTGTATAGCAAATCCACCATATATTTTGGAGGAAATCTCAACGCACTGCAAGAACTTTAGCGAACTCAAGATTATGGGGCCATGTGACATTTTCTTTGCTTCATCACTTGCTGCGTTTCTTCCAAAATTAAGAGTCTTGAGCCTACGATGCTCAATGCTATATAAGGATGTTCTCATTCTCATCCTTGACAGCTTACAACACTTGGAAGTGCTCAACATATCACATTGTGTTCTGATGGAAGCCCTCCCAGCTCCTCAACAGAAAAGAATCATTAAAGAAATTGATGTGACTATTCGTCAGAAGGCTTCTCGGTTACGTGAATTTCTCACATGCATGGAAGACTCATGTGTCATGTGCCAACGAACAAGAACTGATGAAGGACTGATTAGGTGGTACAAGTACGAGGAAGGGCTTTGGAAAACAGATGAGGTGAGGTCTCTCTCACTTTAG 915 0.424 MEDNDYIRRWEDLDIDILVKIFQLLDIFELTSGISRVCSAWRLACCDPLLWKTLDLSMLRSNFIKIPLEPFVYVDGRSDRTLTRILKISLSLSQQSIMTLIFHFNLYVSDEQLTYTAERCPQLRRLVLPAWNRIKKPGMCKAIRGWKELESLTMPCIANPPYILEEISTHCKNFSELKIMGPCDIFFASSLAAFLPKLRVLSLRCSMLYKDVLILILDSLQHLEVLNISHCVLMEALPAPQQKRIIKEIDVTIRQKASRLREFLTCMEDSCVMCQRTRTDEGLIRWYKYEEGLWKTDEVRSLSL* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2113 304 PANTHER F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED 7 302 - -
Gso10g2113 304 SUPERFAMILY RNI-like 89 234 - -
Gso10g2113 304 Gene3D - 6 55 - -
Gso10g2113 304 Pfam F-box-like 16 56 IPR001810 GO:0005515
Gso10g2113 304 PANTHER BNAANNG30020D PROTEIN 7 302 - -
Gso10g2113 304 SUPERFAMILY F-box domain 6 62 IPR036047 GO:0005515
Gso10g2113 304 Gene3D Ribonuclease Inhibitor 78 236 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2113 Gso-Chr10 48124709 48128455 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2113 - - gmx:100791249 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2113 10 48124709 48128455 Gso10g2113 10 48124709 48128455 ECH
Gso20g1263 20 42698110 42703047 Gso10g2113 10 48124709 48128455 GST