Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2087 ATGTCAATTCTGTGTGGTGTGCCTCTTCTTGAATGTGTGTACTGTCTGGCTTGTGCTCGTTGGGCTTGGAAAAGATGTATTTACACTGCAGGCCATGACAGTGAAACTTGGGGACTTGCCACTGTAGAAGAATTTGAGCCTGTTCCCCGCCTTTGTCGGTATATTTTAGCCGTGTATGAAGATGATATTCGACACCCTCTTTGGGAACCTCCTGGTGGCTATGGAATTATCCCTGATTGGTTAATACTCAAGAAGGCATATGAAGATACACAAGGAAGGGCCCCGCCCTATATGCTGTATCTTGATCATGATCATGCTGATATAGTTCTTGCCATTAGGGGACTAAATTTGGCAAAGGAGAGTGACTATGCAGTGTTGTTGGATAATAGATTGGGGAAGAGGAAGTTTGATGGGGGGTATGTTCACAACGGGCTGTTGAAGGCTGCTGGATGGGTTATGGATGCTGAATGTGAAATTCTAAAGGAGTTGGTAGAGAAGTATCCAAACTATTCTCTGACTTTTACTGGACATTCCCTTGGATCAGGAGTAGCAGCAATGTTGAGCATGGTAGTGGTGCAAAATCACGATAAACTTGGACATATTGAGAGGAAGAGGGTCAGGTGCTATGCTATTGCACCTGCTAGGTGTATGTCACTGAATTTGGCGGTCAGATATGCAGATGTCATCAACTCTGTTGTGCTTCAGGATGACTTCTTACCAAGGACAGCCACTCCATTGGAGGATATATTCAAATCTCTTTTCTGTTTGCCATGCTTATTGTGCTTGAGGTGCATGAAGGATACATGCATACCAGAGGAGAAGATGCTGAAAGATCCAAGGAGACTCTATGCTCCCGGTCGCCTTTATCACATTGTTGAGAGAAAGCCTTTCAGAATGGGAAGGTTTCCCCCAGTTGTGAGGACAGCAGTGCCAGTAGATGGAAGGTTTGAACACATAGTGCTTTCTTGCAATGCCACATCTGATCATGCCATTATTTGGATAGAGAAAGAAGCCCAAAGGGCTTTAGATTTGATGAGGGAGAAAGATAGTATCATGGAAATACCTGCAAATCAAATCATGGAGATGCAAGAAACATTAGCTAGACACAGTGAAGAATACAAAGCAGCATTACAAAGGGCTAAAACATTTGATGTTCCACATGCTTATACACCAGAATCACAATATGGAACTTTTGATGAGGAGGGAGAGGAGAGTTCAAGAAGGTCACAAGGTGAATCTTCTTTTGGTTCAACTAATAGGAGTACAGTGGATGAAACTTGGGATGAAATGATCGAGCGTCTTTTTGATAAGGATGAGCATGGTCACATTTTGCTCATGAAATAA 1344 0.4308 MSILCGVPLLECVYCLACARWAWKRCIYTAGHDSETWGLATVEEFEPVPRLCRYILAVYEDDIRHPLWEPPGGYGIIPDWLILKKAYEDTQGRAPPYMLYLDHDHADIVLAIRGLNLAKESDYAVLLDNRLGKRKFDGGYVHNGLLKAAGWVMDAECEILKELVEKYPNYSLTFTGHSLGSGVAAMLSMVVVQNHDKLGHIERKRVRCYAIAPARCMSLNLAVRYADVINSVVLQDDFLPRTATPLEDIFKSLFCLPCLLCLRCMKDTCIPEEKMLKDPRRLYAPGRLYHIVERKPFRMGRFPPVVRTAVPVDGRFEHIVLSCNATSDHAIIWIEKEAQRALDLMREKDSIMEIPANQIMEMQETLARHSEEYKAALQRAKTFDVPHAYTPESQYGTFDEEGEESSRRSQGESSFGSTNRSTVDETWDEMIERLFDKDEHGHILLMK* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2087 447 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 446 - -
Gso10g2087 447 Coils Coil 359 379 - -
Gso10g2087 447 SUPERFAMILY alpha/beta-Hydrolases 41 270 IPR029058 -
Gso10g2087 447 CDD Lipase_3 44 241 - -
Gso10g2087 447 Pfam Lipase (class 3) 109 243 IPR002921 GO:0006629
Gso10g2087 447 Pfam Lipase 3 N-terminal region 9 74 IPR005592 GO:0016042
Gso10g2087 447 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 446 - -
Gso10g2087 447 Gene3D alpha/beta hydrolase 39 252 IPR029058 -
Gso10g2087 447 MobiDBLite consensus disorder prediction 389 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2087 Gso-Chr10 47840868 47845374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2087 1 447 Miscellaneous Gene Families AT3G49050 71.158 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2087 - - gmx:100800742 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2087 10 47840868 47845374 Gso10g2087 10 47840868 47845374 ECH