Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2072 ATGGATTCAGAGACGAGTAGAGGTGCTTCTTTGACGGTGAAGTATTTGCAAATGGGGATATGGTGGTTCTCAGTGATGATCTTTGTTGGGTATTTAATGGTTTGGATTGTGATGCCCACCAACATCTTCTTTCCACATTGGTTTCCAGATATTCAAGCTAAGGCAGATTCAATATACTTCGGCAGACAAGGGACAACCATACTCATTTACACGTTTCCAATTTTATTAATAGCCACTTTAGCTAGTCTATATTTCCACTTGGAGCAAAAACGTTCTAATCACAATACCGAAAGCAAGGTGGGATTCTTAGGATTTGCATCATGGAAAAGACCATTGCTTGGAACTGGTCCTCTTGGGATAATCACTATGACAGAGCTCTCTTTCATTATCATGTTTGTTTTACTATTAATTTGGTCCTTGTGCTTCTACATACATGGCATGTTTGCAAGCGTGGCACTAGATGCAGCTAAGGAAAGATTTCATGAGTGGGAAGTCAAGCTGGAATATTCAGCCCTCGCTTTAGGCATTGTTGGGTATATTTGCTTAGCCTTATTGTTCTTTCCGGTCACGAGAGGGTCTTCAATTTTGCGGTTCATTGGCTTAACTTCAGAGGGAAGCATCAAGTATCATATCTGGCTAGGACACATTGCAATGACCCTCTTCACAGCCCATGGTCTAGGTTATATTATTTTTTGGGGAAAGACACATCAAATCTTGGAGATATTCAAATGGAACAAAATTGGCGTCTCAAATGTGGCTGGAGCTGTTTCTCTGCTAGCTGGATTAATCCTGTGGGCTGCTACCTTACCTTCCATAAGGCGAAAAGCTTTTGAGCTTTTCTTCTACACTCATTACCTCTACATTGTCTTTGTAATCTTCTTTGTGTTTCATGTGGGATTTTCCAACTCTTGCATAGTACTTCCAGGATTTTACCTATTCATGATCGACCGGTACCTGAGATTCCTACAATCTCAGCAGAAAGTTCGCTTAGTTTCGGCACGTGTTTTGCCTTGTGAAACTGTTGAACTGAACTTCGCCAAGAACATAGGACTGTGCTATGCTCCTACAAGTACCATTTTCATAAATGTTCCTAGTATTTCCAAGTTGCAGTGGCACCCTTTTACAATCAGCTCTTGCAGTGATACTGATTCTGATACTTTAAGCATTGTCATCAAAAGTTCAGGAACATGGTCCAATACTTTGTACCAGAAACTATCATCTTCAATTCCAATATCCCACCTTGATGTTTCAGTTGAAGGGCCCTATGGACCAGCTTCAACCTTTTACTCAAGGCATGAGCTGCTAGTGCTGGTGAGCGGAGGAAGTGGCATTACTCCTTTCATTTCCATAATCCGTTCACTAATTTTTAAGGCCAACACTGAAGGCAGCAAAACTCCTAGAGTTCTTCTAGTATGTGCCTTCAAAAAGTCTATTGATCTCACCACGATAGACCTCATCCTCCCAGTTTCAGCCACTTGCACCGCCTTCGATATCTCACGCTTGCAGCTTCAGATTGAAGCCTATGTAACCAGAGAGAAACAGCCAGATATGAATGACAAAAAGCTAATTCAAACATTATGGTTCAAGCCAAATGCATTGGATGAACCAGTTTCTGCAGTTTTAGGACAAAACAGTTGGCTCTATCTTAGCATTATCATCTCATCCTCCTTTATGTTATTCCTTCTACTTATTGCCATCCTAACTAGATATTACATATATCCAATTGACCATAATACTGACATGATATACCCTTATTTCTCAAGGTCCAGTCTAAGCATGTTATTCATATGCATATCTATAGCCTTTGTAGCAACATCTGCTTTCCTATGGAACAAGAAACAGAACAAGGATTTGGGGCAGATTAAAAACATTTACACATCCAATTCATCAACTTCTCCGGGTTCAGGATACTACAATGCTGACAGAGAATTAGGGAGTCTTCCCCTCCAATCCCTCGTCCAAACAGCTAAAGTACATTATGGAGAAAGACCTAACATAAAAAAAATTCTCTCTGGCTGTAATGGATCAAGCATTGGAGTTCTTGTTAGTGGCCCAAGAAAAATGAGACATGAAGTAGCATCATTATGTACTTCTTGTTCAACAGATGACCTACATTTTGAGTCCCTTAGCTTCAGCTGGTGA 2142 0.4048 MDSETSRGASLTVKYLQMGIWWFSVMIFVGYLMVWIVMPTNIFFPHWFPDIQAKADSIYFGRQGTTILIYTFPILLIATLASLYFHLEQKRSNHNTESKVGFLGFASWKRPLLGTGPLGIITMTELSFIIMFVLLLIWSLCFYIHGMFASVALDAAKERFHEWEVKLEYSALALGIVGYICLALLFFPVTRGSSILRFIGLTSEGSIKYHIWLGHIAMTLFTAHGLGYIIFWGKTHQILEIFKWNKIGVSNVAGAVSLLAGLILWAATLPSIRRKAFELFFYTHYLYIVFVIFFVFHVGFSNSCIVLPGFYLFMIDRYLRFLQSQQKVRLVSARVLPCETVELNFAKNIGLCYAPTSTIFINVPSISKLQWHPFTISSCSDTDSDTLSIVIKSSGTWSNTLYQKLSSSIPISHLDVSVEGPYGPASTFYSRHELLVLVSGGSGITPFISIIRSLIFKANTEGSKTPRVLLVCAFKKSIDLTTIDLILPVSATCTAFDISRLQLQIEAYVTREKQPDMNDKKLIQTLWFKPNALDEPVSAVLGQNSWLYLSIIISSSFMLFLLLIAILTRYYIYPIDHNTDMIYPYFSRSSLSMLFICISIAFVATSAFLWNKKQNKDLGQIKNIYTSNSSTSPGSGYYNADRELGSLPLQSLVQTAKVHYGERPNIKKILSGCNGSSIGVLVSGPRKMRHEVASLCTSCSTDDLHFESLSFSW* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2072 713 SFLD Ferric reductase subgroup (FRE) 18 713 - -
Gso10g2072 713 PANTHER NADPH OXIDASE 15 712 - -
Gso10g2072 713 Gene3D - 416 544 IPR039261 -
Gso10g2072 713 Pfam Ferric reductase NAD binding domain 432 696 IPR013121 GO:0016491
Gso10g2072 713 CDD NOX_Duox_like_FAD_NADP 330 511 - -
Gso10g2072 713 Gene3D - 598 713 IPR039261 -
Gso10g2072 713 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 323 428 IPR017927 GO:0016491
Gso10g2072 713 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 416 488 IPR039261 -
Gso10g2072 713 Pfam FAD-binding domain 327 426 IPR013112 GO:0016491
Gso10g2072 713 SFLD Ferric Reductase Domain 47 713 - -
Gso10g2072 713 Pfam Ferric reductase like transmembrane component 174 295 IPR013130 -
Gso10g2072 713 PANTHER FERRIC REDUCTION OXIDASE 4-LIKE 15 712 - -
Gso10g2072 713 SUPERFAMILY Riboflavin synthase domain-like 327 424 IPR017938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2072 Gso-Chr10 47689195 47693939 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2072 25 713 Miscellaneous Gene Families AT1G01580 51.079 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2072 K00521 - gmx:100779692 1402.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2072 10 47689195 47693939 Gso10g2072 10 47689195 47693939 ECH