Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2051 ATGGCGTCAGGGGACACAGATTCCTTCAGCGATAAGGTAGAAGAGAAGTTCCACGACCACAACTCCGATTCCGATTCCTATTCCGATTCCGATGACGACCACAACAACAGGCCGCCGCCCAAGACCACCGTTTCCAACAACGTTTACCGCCTCTTCGGCCGCGATCAGCCAGTCCACAAGGTCCTCGGCGGCGGAAAACCTGCTGATATTTTGCTATGGAGGAACAGGAGAAGCACTGGAGTCGTACTTGGTGCAGGCACTGCCTTCTGGATTTTCTTTGAGTTGATGCAATACCATCTCATAACTTTTATTTGCCATTTATTGATTGTGTCTCTGGCGGCACTTTTCTTGTGGTCCAATGCATCTGTCTTTATCCACAAGTCTTCACTGCACATCCCTCATGTAGCACTTCCTGAGGAATGCGTTCATCAGGTTGCTTCTGCTTTAACAATTGAGATTAACCGAGCCTTCGTTATTGTGCGGGAAATTGGAACTGGGAGAGATTTAAAGAAGTTCCTTAGCGTTATTGCTGTATTATGGGTTATCTCGGTTATTGGGAGTTGGTTCAACTTCATGACCTTGTTTTACCTATTTTTTGTGTCACTGTTCACGTTGCCACTGCTGTATGAGAAATATGAAGACCAAGTTGATGCATTAGGAGAGAAGGCGATGATTGAAATCAAAAAGCAGTATGCAGTGTTTGATGCTAAGGTTTTGAGCCAGATACCAATAGCAGGTTTTAAAAAGGATTAG 753 0.4515 MASGDTDSFSDKVEEKFHDHNSDSDSYSDSDDDHNNRPPPKTTVSNNVYRLFGRDQPVHKVLGGGKPADILLWRNRRSTGVVLGAGTAFWIFFELMQYHLITFICHLLIVSLAALFLWSNASVFIHKSSLHIPHVALPEECVHQVASALTIEINRAFVIVREIGTGRDLKKFLSVIAVLWVISVIGSWFNFMTLFYLFFVSLFTLPLLYEKYEDQVDALGEKAMIEIKKQYAVFDAKVLSQIPIAGFKKD* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2051 250 PANTHER RETICULON-LIKE PROTEIN 2 248 - -
Gso10g2051 250 MobiDBLite consensus disorder prediction 1 46 - -
Gso10g2051 250 Pfam Reticulon 68 222 IPR003388 -
Gso10g2051 250 ProSiteProfiles Reticulon domain profile. 67 250 IPR003388 -
Gso10g2051 250 MobiDBLite consensus disorder prediction 8 38 - -
Gso10g2051 250 PANTHER RETICULON 2 248 IPR045064 GO:0009617
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2051 Gso-Chr10 47527884 47530825 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2051 - K20721 gmx:100790190 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0552 7 5595035 5597663 Gso10g2051 10 47527884 47530825 ECH
Gso10g2051 10 47527884 47530825 Gso10g2051 10 47527884 47530825 ECH
Gso20g1316 20 43184442 43187366 Gso10g2051 10 47527884 47530825 GST