Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2032 ATGGCGGGTTTTTGGAGCGTGTTTTGTGGGGAATCTGGTTGTTCAGAGGCTGGAAGAATGCCTTGCAGCTATGATTTTAGGCTTCTCATTGATCCTTCCACTTGTGTCAACCATTTGTTGAATTCTTGCTTTGATGTGTTGCTGCTTATCATGCTTGCATGCATTATGATCCAGAAATCATCATTAAAACCATCTCGTGGTCTAACACAGGTGCAAAGATATTCATATTTTCAGCTAGTTTCTGCCATAGCCAACGGTGCTCTTGGGTTGACACTTTTGTGCTTTGGCATTTGGGTTTTAGAAGAAAAGTTGAGGAAAAACCAAACTGCGTTGCCTCTTAATTGGTGGTTGCTAGAAATCTTTCATGGATTAACATGGTTGTTAGTGAGTTTAACAATAACTCTTAAGTTGAAACAACTTCCAAAAGCATGGTCAAGGCCTTTTTCTGTTCTAATCTTCTTGGTTTCTGATTTTTTCTGTGCTTCATCAGTGTTTTATGCAATTAGTAGCAGAGAACTATCCCTTAAGATCTCTTCAGATATTCTATCTTTTCTTGGGGCGATATTATTGTTATTATGCACGTATAAGGAATCCAAGCATAGGGACACTGACAGTGAAATTGATGAAAATCTTTATGCCCCCTTAAATGGTGAGTCCAACAAAAATGATTCTATTAGATATGTAACCCCATTTGCCAAAACTGGATTCTTTGGCAGAATGACATTTTGGTGGTTGAATCCATTGATGAAAATGGGCAAAGAGAAAACACTTCATGATGAAGACATTCCGCGGTTGCGGGAGGAGGATCGAGCAGAAAGTTGTTATTTGCTGTTTCTGGATCAATTGAACCGACAGAAACTGAACGATCAATCCTGGCAGCCATCAGTTTTGAGGACAATAATTTTATGCCATTGGAAAGAAATTTTAATATCAGGATTCTTTGCATTGCTAAAGGTAGTTGCTCTGTCTTCAGGACCTCTTCTTCTGAATTCTTTTATATTGGTTGCTGAGGGTAACGAGAGTTTCAAATATGAAGGTTTTGTGTTGGCCATATCACTTTTCTTTACAAAAAACATAGAATCCTTATCACAAAGGCAATGGTACTTCCGCTGCCGACTCATTGGTCTGAAAGTTAGGTCGTTGCTAACTGCAGCCATTTATAGAAAACAATTGAGGTTATCCAATTCTGCTAGATTGATGCACTCTAGTGGTGAGATAATGAATTATGTGACTGTGGATGCTTATAGAATTGGTGAATTTCCCTATTGGTTTCACCAGACTTGGACAACAAGCTTTCAGCTATGTATCTCATTAGTAATACTTTTTCGTGCTGTTGGATGGGCAACAATTGCCTCCTTGGTGGTGATAGTAATCACTGTGCTTTGCAATACTCCACTCGCAAAGTTACAGCACAAGTTTCAAAGCAAACTTATGGTGACACAAGATGATAGATTGAAGGCTTGTTCTGAGGCTCTTGTGAATATGAAGGTGTTGAAGTTGTATGCGTGGGAAACCAATTTTAGAAGTTCTATAGAGAGATTAAGGAATGAGGAGCTCAAATGGTTGTCTGCAGTGCAATTAAGAAAGGCATACAACACCTTTCTCTTTTGGTCCTCTCCTGTGTTGGTCTCTGCTGCTTCCTTTGGGGCATGTTACTTTCTTAATGTTCCATTGCATGCAAATAATGTTTTCACTTTTGTTGCAACTTTGCGCCTTGTTCAAGATCCAATCAGAACCATCCCTGATGTTATTGGGGTGGTCATTCAGGCAAAAGTCGCGTTTGCTCGGATTGTCAAATTCCTGGAGGCACCTGAACTTCAGAGTGTAAATATCACACAAAGGTGTCTCAATGAGAATAAGAGGGGTTCAATTTTAATCAAGTCTGCTGACTTTTCATGGGAAGATAATGTATCAAAGCCAACACTGAGAAACATAAATTTGGAGGTTAGACCAGGGCAAAAGGTGGCTATCTGTGGAGAGGTTGGCTCAGGCAAATCAACTCTCTTAGCAGCAATTCTCAGAGAAGTTCTTAATACTCAGGGGACAACTGAGGTTTATGGGAAGTTTGCCTATGTTTCTCAAACAGCATGGATACAGACAGGTACAATAAAGGAGAATATATTGTTTGGAGCAGCTATGGATGCTGAAAAATATCAAGAAACACTTCACAGGTCTTCACTATTGAAGGACCTTGAGTTGTTTCCGCATGGTGATCTCACTGAAATAGGGGAGAGAGGAGTCAATCTGAGTGGAGGTCAGAAGCAGCGAATTCAACTTGCACGTGCACTATATCAGAATGCTGATATATATCTCTTGGATGATCCATTCAGTGCTGTTGATGCACATACTGCAACAAATTTGTTTAATGTAAGGAAAAGTTCTTTTCTTCAGGTACTACATTCATATCTTGGTGTTATTATATTTTTACTTATAGATGGCTTTTCAACTGGACAGGAATACATAATGGAAGGACTTGCAGGGAAAACAGTCTTGCTCGTTACTCATCAAGTTGACTTCCTTCCAGCATTTGATTCTGTTTTGTTGATGTCAGATGGGGAAATCATAGAAGCTGCTCCGTATTACCATTTGTTGAGCTCAAGCCAAGAATTTCAGGACCTTGTGAATGCCCACAAAGAGACTGCTGGTTCTGACCGACTTGTGGAAGTTACTTCTCCGCAGAAACAATCAAATAGTGCTAGAGAAATTAGAAAAACATCTACGGAGCAGCATTATGAAGCATCAAAAGGTGATCAATTGATTAAGCAAGAAGAGAGAGAGAAAGGAGACCAAGGGTTCAAACCGTATATACAGTATCTGAATCAGAACAAAGGATATATATACTTCTCTGTGGCTGCTCTTTCTCACCTAACATTTGTGGTTGGCCAAATATTGCAAAACTCATGGATGGCCGCTAGTGTTGACAATCCTCAAGTCAGCACTTTGCAATTGATTCTTGTTTACTTGCTGATTGGAGTTATTTCAACACTATTCTTGTTGATGAGAAGTCTTTTTGTAGTTGCTTTGGGCCTTCAATCATCAAAGTCTTTGTTTTCACAGTTACTGAACTCCCTTTTTCGTGCCCCCATGTCATTTTATGACTCCACTCCTTTAGGAAGGATACTTAGTAGGGTCTCCTCAGATCTCAGCATTGTGGACCTTGATGTCCCATTTGGCTTTGTTTTTGCTGTGGGAGCCACTATGAATTGCTATGCTAATCTAACCGTTTTAGCTGTTGTTACTTGGCAAGTCTTGTTTGTCTCCATACCAATGATTTATTTTGCAATCAGCCTGCAGAGATATTACTTTGCCTCTGCAAAAGAACTGATGCGGCTGAATGGCACCACAAAATCCTTTGTTGCTAACCATCTTGCTGAATCTGTTGCTGGAGCTGTGACAATAAGGGCTTTTGAGGAGGAAGATCGTTTTTTTGAGAAAAATCTTGATCTGATTGATGTCAATGCGAGTCCTTACTTCCAAAGTTTTGCAGCAAATGAGTGGTTGATTCAACGATTAGAAACAGTCAGTGCTGTTGTTCTTGCATCTGCGGCACTATGCATGGTTGTACTTCCACCTGGAACTTTCTCCTCTGGATTTATTGGCATGGCTCTCTCTTATGGCCTTTCACTTAACATGTCCTTAGTATTTTCAATTCAAAATCAATGCAACATAGCCAATTATATAATATCAGTGGAGAGGCTAAATCAGTACATGCATATACCAAGTGAGGCTCCAGAAGTAATAGCAGGAAATCGTCCTCCTGCGAATTGGCCAGTTGCTGGTAGAGTACAAATAAACGAATTGCAGATACGTTATAGGCCTGATGCGCCACTAGTACTTCGTGGAATCACATGCACATTTGAAGGAGGCCACAAGATTGGTATTGTTGGCAGAACAGGCAGTGGAAAGTCTACTCTTATAGGCGCCTTATTCCGTCTAGTAGAGCCAGCAGGTGGAAAAATCATTGTTGATGGCATTGACATTTGCTCCATTGGTCTCCATGATTTGAGGTCCCGTTTTGGTATTATACCTCAGGATCCTACTCTTTTTAATGGGACAGTCAGATACAATTTGGACCCATTATCACAACACTCTGATCAAGAGATATGGGAGGCTCTTGGGAAGTGTCAGTTGCAAGAGACTGTCCAGGAGAAAGAGGAGGGATTAGACTCTTCAGTTGTTGAAGCTGGAGCAAACTGGAGCATGGGACAACGACAGTTATTCTGTTTGGGGCGTGCTCTTCTAAGGCGAAGTAGGATATTGGTGCTTGATGAAGCAACTGCATCAATTGATAATGCAACTGATTTGATTTTGCAGAAAACCATTAGGACCGAGTTTTCAGATTGTACAGTGATCACAGTAGCTCACAGGATACCAACTGTGATGGATTGCACTAAGGTTCTTGCCATCAGTGATGGGAAACTTGTGGAGTATGATGAGCCGATGAACTTGATAAAGAGAGAAGGATCACTGTTTGGGAAGCTTGTTAAGGAATACTGGTCTCATTTTCAGTCTGCAGAATCTCATTGA 4527 0.4049 MAGFWSVFCGESGCSEAGRMPCSYDFRLLIDPSTCVNHLLNSCFDVLLLIMLACIMIQKSSLKPSRGLTQVQRYSYFQLVSAIANGALGLTLLCFGIWVLEEKLRKNQTALPLNWWLLEIFHGLTWLLVSLTITLKLKQLPKAWSRPFSVLIFLVSDFFCASSVFYAISSRELSLKISSDILSFLGAILLLLCTYKESKHRDTDSEIDENLYAPLNGESNKNDSIRYVTPFAKTGFFGRMTFWWLNPLMKMGKEKTLHDEDIPRLREEDRAESCYLLFLDQLNRQKLNDQSWQPSVLRTIILCHWKEILISGFFALLKVVALSSGPLLLNSFILVAEGNESFKYEGFVLAISLFFTKNIESLSQRQWYFRCRLIGLKVRSLLTAAIYRKQLRLSNSARLMHSSGEIMNYVTVDAYRIGEFPYWFHQTWTTSFQLCISLVILFRAVGWATIASLVVIVITVLCNTPLAKLQHKFQSKLMVTQDDRLKACSEALVNMKVLKLYAWETNFRSSIERLRNEELKWLSAVQLRKAYNTFLFWSSPVLVSAASFGACYFLNVPLHANNVFTFVATLRLVQDPIRTIPDVIGVVIQAKVAFARIVKFLEAPELQSVNITQRCLNENKRGSILIKSADFSWEDNVSKPTLRNINLEVRPGQKVAICGEVGSGKSTLLAAILREVLNTQGTTEVYGKFAYVSQTAWIQTGTIKENILFGAAMDAEKYQETLHRSSLLKDLELFPHGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTATNLFNVRKSSFLQVLHSYLGVIIFLLIDGFSTGQEYIMEGLAGKTVLLVTHQVDFLPAFDSVLLMSDGEIIEAAPYYHLLSSSQEFQDLVNAHKETAGSDRLVEVTSPQKQSNSAREIRKTSTEQHYEASKGDQLIKQEEREKGDQGFKPYIQYLNQNKGYIYFSVAALSHLTFVVGQILQNSWMAASVDNPQVSTLQLILVYLLIGVISTLFLLMRSLFVVALGLQSSKSLFSQLLNSLFRAPMSFYDSTPLGRILSRVSSDLSIVDLDVPFGFVFAVGATMNCYANLTVLAVVTWQVLFVSIPMIYFAISLQRYYFASAKELMRLNGTTKSFVANHLAESVAGAVTIRAFEEEDRFFEKNLDLIDVNASPYFQSFAANEWLIQRLETVSAVVLASAALCMVVLPPGTFSSGFIGMALSYGLSLNMSLVFSIQNQCNIANYIISVERLNQYMHIPSEAPEVIAGNRPPANWPVAGRVQINELQIRYRPDAPLVLRGITCTFEGGHKIGIVGRTGSGKSTLIGALFRLVEPAGGKIIVDGIDICSIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLSQHSDQEIWEALGKCQLQETVQEKEEGLDSSVVEAGANWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFSDCTVITVAHRIPTVMDCTKVLAISDGKLVEYDEPMNLIKREGSLFGKLVKEYWSHFQSAESH* 1509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2032 1508 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 618 790 IPR027417 -
Gso10g2032 1508 CDD ABC_6TM_ABCC_D2 944 1237 IPR044726 GO:0140359
Gso10g2032 1508 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 818 1508 - -
Gso10g2032 1508 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 73 789 - -
Gso10g2032 1508 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 309 589 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso10g2032 1508 Pfam ABC transporter transmembrane region 946 1197 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso10g2032 1508 Pfam ABC transporter transmembrane region 308 574 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso10g2032 1508 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1262 1496 IPR003439 GO:0005524
Gso10g2032 1508 ProSitePatterns ABC transporters family signature. 749 763 IPR017871 GO:0005524
Gso10g2032 1508 SMART AAA_5 651 853 IPR003593 -
Gso10g2032 1508 SMART AAA_5 1288 1480 IPR003593 -
Gso10g2032 1508 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1252 1489 IPR027417 -
Gso10g2032 1508 Gene3D ABC transporter type 1, transmembrane domain 296 608 IPR036640 GO:0005524|GO:0016021
Gso10g2032 1508 SUPERFAMILY ABC transporter transmembrane region 297 602 IPR036640 GO:0005524|GO:0016021
Gso10g2032 1508 MobiDBLite consensus disorder prediction 901 920 - -
Gso10g2032 1508 Pfam ABC transporter 1279 1427 IPR003439 GO:0005524
Gso10g2032 1508 Pfam ABC transporter 642 776 IPR003439 GO:0005524
Gso10g2032 1508 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 819 868 IPR027417 -
Gso10g2032 1508 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 626 876 IPR003439 GO:0005524
Gso10g2032 1508 Gene3D - 619 882 IPR027417 -
Gso10g2032 1508 SUPERFAMILY ABC transporter transmembrane region 947 1242 IPR036640 GO:0005524|GO:0016021
Gso10g2032 1508 MobiDBLite consensus disorder prediction 888 920 - -
Gso10g2032 1508 Gene3D ABC transporter type 1, transmembrane domain 910 1243 IPR036640 GO:0005524|GO:0016021
Gso10g2032 1508 Gene3D - 1246 1497 IPR027417 -
Gso10g2032 1508 CDD ABCC_MRP_domain1 624 853 - -
Gso10g2032 1508 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 956 1225 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso10g2032 1508 CDD ABC_6TM_ABCC_D1 310 597 IPR044746 GO:0140359
Gso10g2032 1508 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 818 1508 - -
Gso10g2032 1508 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 73 789 - -
Gso10g2032 1508 CDD ABCC_MRP_domain2 1260 1480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2032 Gso-Chr10 47336018 47344010 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2032 622 898 Calmodulin-binding Proteins AT2G36910 27.703 4.19e-20 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2032 K05666 - gmx:100817665 2882.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2032 10 47336018 47344010 Gso10g2032 10 47336018 47344010 ECH