Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2029 ATGGAAGCTGTTTGTCTTCACTGTGGCGACAGAGGCTTTCCAGAGACATTGGTTTTTTGCACTGAGTGTAAGGCTTATGCGTTGCATAGGTACTGTTTAAAGGGGCCTGTGGTTTTTACTGATGCTGTTACATGGTTTTGTGAGGATTGTGCAACAAAGCTTGGGGTGCCACCTGCTCTTGACCAATCTACACCTATCTCATCTGTATCAAGAAACAATTGCATTCAGAGAGTGAAAAAACACAATAAACAGCGAAAAAAGAAGCTTAAAAAGAAGCAGAAGAAAGGAAAAGCTAACTCTAGCTTAGTTGCTAAAACAAAGGAAGTGTTATCTGGTTGTCACATTTCACCTGAGCCTGAGCATCCTCAATGTAGTAACAGAGGTGAAGAATGTGAGATGAAAGATGAATGTGGACCAGCTCCAAGGGATGTAGCTAATTTTGATGTAGGTGAAGAAGAAAGTGTGGCAAGGGATTTAGCTAATTCTGATGAAGGTTTCAAATCTGTTCCAGTTTCTCAAGGAGCTACCGATAATGATTCAGGTTGTGTAGAATTAGATGGTCATGTTTATGCACACCCTACTATTGATCCAATCTGGAGGGGAAGTATGTACTTCTGCAATGAAACTAATGGTACTGTCAATGGAGTTCTGGCTCATATGTCCAATTTAGCGTGCTCCAAAGTTGCGGAGGAGACAGGACATTTCCCAGAAGTGCTTCATGCTGAATTGCTTCCCAGAGATAAGGTGTGGCCTGAAAGTTTCAAGAGTAGGAGGCCAACTGATCAGGACATTGCTCTTTTTATCTTTCCAGACACTGAAGGATCTGAAAAGGACTTTGATAAGCTGGTTGAAGATATCATGATCAATGAGCATGTCATAAGAATTGTGGCTAAAAAAGCAGAGCTTTTAATTTTTCATTCTATCGAGCTTCCAATCCAATATTGGAGATTTGAAGCCAAGTATTATTTGTGGGGTGTCTTCAGAAGAAAGCAAACTTCAGAAGAGACAAATGATGCTGTGTACAGAGATTGA 1032 0.407 MEAVCLHCGDRGFPETLVFCTECKAYALHRYCLKGPVVFTDAVTWFCEDCATKLGVPPALDQSTPISSVSRNNCIQRVKKHNKQRKKKLKKKQKKGKANSSLVAKTKEVLSGCHISPEPEHPQCSNRGEECEMKDECGPAPRDVANFDVGEEESVARDLANSDEGFKSVPVSQGATDNDSGCVELDGHVYAHPTIDPIWRGSMYFCNETNGTVNGVLAHMSNLACSKVAEETGHFPEVLHAELLPRDKVWPESFKSRRPTDQDIALFIFPDTEGSEKDFDKLVEDIMINEHVIRIVAKKAELLIFHSIELPIQYWRFEAKYYLWGVFRRKQTSEETNDAVYRD* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2029 343 Coils Coil 75 95 - -
Gso10g2029 343 ProSitePatterns Zinc finger PHD-type signature. 5 50 IPR019786 -
Gso10g2029 343 PANTHER OS12G0161900 PROTEIN 1 340 - -
Gso10g2029 343 PANTHER - 1 340 - -
Gso10g2029 343 SMART PHD_3 4 51 IPR001965 -
Gso10g2029 343 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 54 IPR013083 -
Gso10g2029 343 SUPERFAMILY FYVE/PHD zinc finger 2 55 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2029 Gso-Chr10 47305206 47308851 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2029 - - gmx:102666082 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2029 10 47305206 47308851 Gso10g2029 10 47305206 47308851 ECH