Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1958 ATGCCAATGCTTCGTTGCTTCTTCAACAAAGCCTTTAAAGCCTCCAAATGTGCAACCTTGTTGCAACTCACAATTCCACGCATAAAGTTGCTGAGAAACAGAAGAGAGGTTCATCTGAAGCAGATGCGAAGAGACGTTGCTAAGCTACTTGAGGCTGGTCAAGAAGCCAAGGCTAGCCTTAAGGTGGAGCATGTTATGAGAGAGGAGAACATCATGGCTGCTCAAGACATCATTCAACTCTTTTGTGAACTTATTGCTGCACGCATTGCATTTGTTCAATCACAAAGGAAATGTCCCCTTGATTTGAAGGAAGCAATATCTAGTGTATGTTTTGCTGCACCAAGATGTGCGGATCTGCCAGAGTTATTGCAGGTTCAGTCGCTATTTGCTTCCAAATACGGAAAGGATTTTGTATCTGCAGCAACTGATCTCACCCCTGACTGCAGTGTTAATGGCCAGTTAATAGAGCTGTTGTCAGTTCAAGCACCTTCACAGGAAAAGAAACTGAAACTTCTAAAAGAAATTGCTGTTGAGCATAAGTTAGACTGGGATCCAACTGCCTCAGAAACCAAGTCCTTTAAAAAACATGAGGACTTACTGAATGACCCCATTCAATTTTGTAGTCAATGTGTGTCAAAATTGCCTCTTCCTGAAGAAAAACACACTGAAGTTGATCTTCAATCATCAAGCCAATCTGGATCACTTGGATCAGACAAACATAAACCTAATACTTCATTTGATAAAAAGGACAGTGAACAGTCTATGTCATTCATCTCAACTCCCCTTGATAATAAGCTTACCAAGAAAAATGGTGCACATGTGTCAGATAGCAGCTTTGAGAATCCATTCTTTGTAAGTGTTGGTAATAAATCTGAAACAGAAAGGGAACATTTCACTGAACAAAATGCTGCAAATGACTATGATGATGGTGGCATAAATAATGTGGAGTTTGAGCCTGCCTTCTCATTCTCTCATTCATCAAGTTTTCCTTCATTTGATATACCCAAGGAAGATTTTGGTTCTTCCCTACACAATCATTCTGTATTGGATGACAAATCCTCTCATCACCAGCTTAAGAGATTGCCTTCACTAGATGATTATTCGGGTTTCTCATACCCAAACTTATTCACCCCAAAAAACTCAAATAATTGGTCTCATACATTCAGATAA 1170 0.3974 MPMLRCFFNKAFKASKCATLLQLTIPRIKLLRNRREVHLKQMRRDVAKLLEAGQEAKASLKVEHVMREENIMAAQDIIQLFCELIAARIAFVQSQRKCPLDLKEAISSVCFAAPRCADLPELLQVQSLFASKYGKDFVSAATDLTPDCSVNGQLIELLSVQAPSQEKKLKLLKEIAVEHKLDWDPTASETKSFKKHEDLLNDPIQFCSQCVSKLPLPEEKHTEVDLQSSSQSGSLGSDKHKPNTSFDKKDSEQSMSFISTPLDNKLTKKNGAHVSDSSFENPFFVSVGNKSETEREHFTEQNAANDYDDGGINNVEFEPAFSFSHSSSFPSFDIPKEDFGSSLHNHSVLDDKSSHHQLKRLPSLDDYSGFSYPNLFTPKNSNNWSHTFR* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1958 389 MobiDBLite consensus disorder prediction 221 269 - -
Gso10g1958 389 Coils Coil 39 59 - -
Gso10g1958 389 MobiDBLite consensus disorder prediction 226 240 - -
Gso10g1958 389 Gene3D - 5 193 IPR042277 -
Gso10g1958 389 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 265 387 - -
Gso10g1958 389 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 1 256 - -
Gso10g1958 389 PANTHER IST1 FAMILY MEMBER 265 387 IPR005061 GO:0015031
Gso10g1958 389 PANTHER IST1 FAMILY MEMBER 1 256 IPR005061 GO:0015031
Gso10g1958 389 Pfam Regulator of Vps4 activity in the MVB pathway 19 181 IPR005061 GO:0015031
Gso10g1958 389 MobiDBLite consensus disorder prediction 249 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1958 Gso-Chr10 46597035 46599926 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1958 - - gmx:100816410 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g1958 10 46597035 46599926 Gso10g1958 10 46597035 46599926 ECH