Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1618 ATGGCTTGGACAACCCTCAAAGGTTCTCCCAGAATGTCTTCTCATCCAAGGCCTCTTTCTTGGATTGTGATTATGGTGGGAGCACTGGCATTTTTCTTAATTTATGCTTCCTGGGTTCTTGTATCATCCCCAATTGGTGCCACGGTTCAGGGATATTTTTATAGTGTAGGTAGTTCAGAGAAGCTAGATTTGCCTGTGTCTTCAGTGAATGAAGCTTCTATTAATGATGGTCACTCGAATACGAGTTTAGATCTTGTTGATAAAAACCCTCCCTCTGAGGATCTGCAATCTTCCACAATTTCCACTGAGGTGCCTAGCGATAGTAAGACAGAACAAACTGATACCACTTTAAACTCACAAGTGGACTTGAGTGACTCTACTTCAGTGAACCTTACAATGACCAAGGAAGTGAATAATAACGCCACAGATGTAGCCAATAGTAGCTTGCCTACTCAAGAAAATTCACAAGTTGATTTGAATTCAAAAACAACTACGTCATTGGTAGGTATCAATTCTTCTAATGAGACAGATAATATTAGAATGGAGGAACCCACTTCAGTGGCTTCGATCAATCCGTCCAGTGCTGTAAGTACAGCACCAAATGAGACCTCTATCTCTTCCGGTGATTCCACTTCAACTGCTGTTCCAGCATCAGTAGAGAAGCCAAATAACACACCCTCTGCTGGCTGTGATCTGTACCGTGGAAATTGGATACATGATCCATTGGGACCGTTATACACAAACAATTCGTGCCCTGTATTGACACAGATGCAGAATTGCCAGGGTAATGGGAGGCCTGATAAGGATTATGAAAATTGGCGATGGAAGCCCTTTCAATGTGACCTCCCACGATTTGATCCCAAAAAGTTCTTGGAGCTGATGAGAGGGAAGACCTTGGCTTTCATTGGAGATTCAGTAGCCCGAAACCAGATGGAATCAATGCTATGTATTCTGTGGCAGGTAGAGACACCAAAGAATCGGGGAAATCGTAACATGCAACGATATTATTTTAGGTCCACTTCTGTTATGATTGTCAGGATATGGTCCTCGTGGCTTGTCAAACTAACATCCGAACCATTTGACTATGCTCCCGGCGGTGTGGATAAGCTCCATCTTGATGCCCCTGATGAGAAGTTGATGGAACACATCCCAAACTTTGATGTGGTTGTTCTTTCTTCTGGTCATTGGTTTGCCAAGCAGTCTGTGTATATTTTGAACAATGAGATAGTGGGAGGACAGTTGTGGTGGCCTGACAAGTCTCGAAAGATGAAGATTGACAGTGTTAAAGCATATGGCATATCTGTTGAAACATTTCTAACTGCTATTGCTACAATTCCAAATTACAAAGGGCTTACAATAGTGCGATCCTACTCACCTGACCATTATGAGGGTGGAGCATGGAACACAGGTGGATCGTGCACTGGGAAGGCTAAGCCTCTTGCACCTGGTGAACTGGTGGAAAATGTGCACACGAATATAATGCATGAGCAACAGGTGACGGGCTTTAACCGTGCAGTGGAAAGGGCAACAAATGGATCAAAGTTGAGGCTAATGGATATCACTGAAGCCTTTCAATACAGGCATGATGGTCACCCTGGTCCTTACAGGAGTCCTGATCCCAATAAGATTACGAAACGTGGACCTGATGGAAGGCCACCACCACAGGATTGCTTGCACTGGTGCATGCCAGGCCCCGTTGATACATGGAATGAACTTGTGTTTGAAATCATTAGGAGAGAATATGAAGGTGGAAGTGCATCATGA 1764 0.4393 MAWTTLKGSPRMSSHPRPLSWIVIMVGALAFFLIYASWVLVSSPIGATVQGYFYSVGSSEKLDLPVSSVNEASINDGHSNTSLDLVDKNPPSEDLQSSTISTEVPSDSKTEQTDTTLNSQVDLSDSTSVNLTMTKEVNNNATDVANSSLPTQENSQVDLNSKTTTSLVGINSSNETDNIRMEEPTSVASINPSSAVSTAPNETSISSGDSTSTAVPASVEKPNNTPSAGCDLYRGNWIHDPLGPLYTNNSCPVLTQMQNCQGNGRPDKDYENWRWKPFQCDLPRFDPKKFLELMRGKTLAFIGDSVARNQMESMLCILWQVETPKNRGNRNMQRYYFRSTSVMIVRIWSSWLVKLTSEPFDYAPGGVDKLHLDAPDEKLMEHIPNFDVVVLSSGHWFAKQSVYILNNEIVGGQLWWPDKSRKMKIDSVKAYGISVETFLTAIATIPNYKGLTIVRSYSPDHYEGGAWNTGGSCTGKAKPLAPGELVENVHTNIMHEQQVTGFNRAVERATNGSKLRLMDITEAFQYRHDGHPGPYRSPDPNKITKRGPDGRPPPQDCLHWCMPGPVDTWNELVFEIIRREYEGGSAS* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1618 587 Pfam PMR5 N terminal Domain 229 281 IPR025846 -
Gso10g1618 587 MobiDBLite consensus disorder prediction 73 128 - -
Gso10g1618 587 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 7 584 IPR029962 GO:0016413
Gso10g1618 587 MobiDBLite consensus disorder prediction 527 556 - -
Gso10g1618 587 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 282 575 IPR026057 GO:0016740
Gso10g1618 587 MobiDBLite consensus disorder prediction 186 223 - -
Gso10g1618 587 MobiDBLite consensus disorder prediction 140 159 - -
Gso10g1618 587 PANTHER PROTEIN YLS7 7 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1618 Gso-Chr10 42716602 42721466 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1618 - - gmx:100777725 1208.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g1618 10 42716602 42721466 Gso10g1618 10 42716602 42721466 ECH