Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1617 ATGCAATTTGTAGATCCCTTGCATTGTTCAGATACAAAGAGCCCCAAAATGTCCAAACCTCAAAATGATCCCCTTTTGCAATCGGAAACAACTTGTGGAACACTTCTCTATGAACTTCAGATAATATGGGACGAAGTTGGGGAGGCTGAGTCTGACAGAGATAGAATGCTGTTTGAGCTTGAACAAGAGTGTCTAGAAGTATACCGAAGGAAGGTAGATCTAGCAAATCGGTCTAGAGCTCAGTTAAGGCAGGCAATTGCTGATTGTGAGGCAGAACTTGCCGCCATTTGTTCATCAATGGGAGAGAGACCAGTGCATATTCGTCAGGCTGATCAAAATGCTGGAAGCCTGAAGGAAGAGCATGCAAGAATTCTTCCGCAGTTGGAGGAGATGCAAAAGAGGAAAATTGAGCGTAGAAATCAATTTATAGAAGTTCAAGAGCAGATTCAAAGCATTTCAATTGAAATATATGGTCCTAGAGAATATATTCCTGCAGTCGAAGATGAAACTGATTTATCCTTGAGAAAACTAGAAGAATTGCATAGGCAGCTGCATGCACTTCAGATTGAGAAGAGTAGTCGCTTAAAGCAAGTCCAGGAGCACCTGTATACATTAAATTCTCTTTGTTTAGTGCTTGGTTTTGACTTTAAGCAGACAATTAATGGAATTCATCCCAGTTTATTGGACTCAGAAGGATCTAAGAGTGTAAGTAATGACACCATTCAGCAATTAGCTGTTGCTATACAAGAACTGCGGGAAGTTAAATTACAGAGAATGCAGAAGCTCCAAGATCTTGCCACTACAATGTTGGAGCTCTGGAATTTGATGGATACCCCTATTGAAGAGCAACAGATGTTTCAGAATGTTACATGTAATATAGCTGCTTCAGAACATGAAGTAACTGAACCAAACACCTTGTCCGTGGACTTCATCAATTTGGTTGAGGCGGAAGTAGCTAGGTTAGAAGCGTTAAAATCAAGCAAGATGAAAGAGCTTGTATTAAAGAAAAGAACAGAGCTGGAGGAGATTTGTCGAAAGACTCATTTGATTCCAGAAATAGATAATGCAGTGGAATCCGCTGTTGATGCCATAGAATCTGGATCTGTGGACCCTGCTTGCATTCTTGAACAAATTGAACTTCAGATTTCCCAAGTCAAAGAGGAAGCTTTTGGCAGAAAAGAGATACTTGAAAAGGTTGAGAAATGGTTGGCAGCATGCGATGAAGAGTCTTGGCTTGAGGAGTACAACAGGGATGATAATCGATACAATGCTGGGAGAGGTGCTCATCTTACTCTTAAGCGAGCTGAGAAAGCTCGTGCCTTGGTTAACAAAATTCCAGCAATGGTAGATGGTCTGACTTCAAAAACTATTGCATGGGAGAAGGAAAAAGGCATTGAGTTCACATATGATGGTATTCGTCTTCTTTCTATGCTTGAAGAATACAATATATTACGGCAAGGGAAAGAGCAAGAACGTCGTAGGCAGCGGGATCTGAAGAAACTCCAGGGACAAATGATAGCTGAACAGGAGGCACTCTATGGGTCAAAGCCAAGCCCTTCAAAGCCCCAAAGTGTTAAAAAGGGACCTAGGATGTCAACTGGAGGTGCAGCTAGTAGAAGAGTCTCTTTGGGAGGAGCGATGCTTCAAACTCCAAAACCTGATTCAAAAGCTACTCACTCACGTGCCACAAGAAAGATTGACAAAGCGCACCAAATTGAGCATCTAAATTACCTGGATGATGGCATTGCTGGTTTATCAGCAGCTAGAAGAGGGCTGGACATTGCTGGCGTTCCTGTAAAAAAACACTCATTTGGTGCTGGGACTCAAGAATCTCCTCTGCTACGACAGCCTTTTTCTCCCATCTCTTCCAACAGTGTATCTTCAAAATCTAATGTGGCAAATGCTACAGATGAACAGAATAAACAGAGTGAGAAGTTGCAGAGAACACTGTCGCTTAACAATGTGCCATTTACTACTCCCTCCAAGACAGCTACTACTGTGGTAGATGAAGAGAATAGAACTCCAAAGGCAATACCTATTCCTGTCCCAGCTACCCCTTCAACAGTATCAGTTCCAATGAATATGGCCATGACTCCAGTTCCTTCTTCAATTTTCAAGAACATAAGCTTGAACTCAACAACTCCCACATCAGTTCCTCATGGAAATGACATGGTTCAAGAGGCTGAATATTCCTTCGAGGAAAAAAGGCTCAGTTATTATATGTTAGCATGA 2232 0.4185 MQFVDPLHCSDTKSPKMSKPQNDPLLQSETTCGTLLYELQIIWDEVGEAESDRDRMLFELEQECLEVYRRKVDLANRSRAQLRQAIADCEAELAAICSSMGERPVHIRQADQNAGSLKEEHARILPQLEEMQKRKIERRNQFIEVQEQIQSISIEIYGPREYIPAVEDETDLSLRKLEELHRQLHALQIEKSSRLKQVQEHLYTLNSLCLVLGFDFKQTINGIHPSLLDSEGSKSVSNDTIQQLAVAIQELREVKLQRMQKLQDLATTMLELWNLMDTPIEEQQMFQNVTCNIAASEHEVTEPNTLSVDFINLVEAEVARLEALKSSKMKELVLKKRTELEEICRKTHLIPEIDNAVESAVDAIESGSVDPACILEQIELQISQVKEEAFGRKEILEKVEKWLAACDEESWLEEYNRDDNRYNAGRGAHLTLKRAEKARALVNKIPAMVDGLTSKTIAWEKEKGIEFTYDGIRLLSMLEEYNILRQGKEQERRRQRDLKKLQGQMIAEQEALYGSKPSPSKPQSVKKGPRMSTGGAASRRVSLGGAMLQTPKPDSKATHSRATRKIDKAHQIEHLNYLDDGIAGLSAARRGLDIAGVPVKKHSFGAGTQESPLLRQPFSPISSNSVSSKSNVANATDEQNKQSEKLQRTLSLNNVPFTTPSKTATTVVDEENRTPKAIPIPVPATPSTVSVPMNMAMTPVPSSIFKNISLNSTTPTSVPHGNDMVQEAEYSFEEKRLSYYMLA* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1617 743 MobiDBLite consensus disorder prediction 609 646 - -
Gso10g1617 743 MobiDBLite consensus disorder prediction 1 25 - -
Gso10g1617 743 MobiDBLite consensus disorder prediction 509 539 - -
Gso10g1617 743 Gene3D - 382 515 - -
Gso10g1617 743 Coils Coil 311 331 - -
Gso10g1617 743 Pfam Microtubule associated protein (MAP65/ASE1 family) 34 523 - -
Gso10g1617 743 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 23 649 - -
Gso10g1617 743 MobiDBLite consensus disorder prediction 604 646 - -
Gso10g1617 743 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 23 649 IPR007145 GO:0000226|GO:0008017
Gso10g1617 743 Coils Coil 65 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1617 Gso-Chr10 42709154 42714658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1617 27 534 EF-hand Containing Proteins AT5G62250 58.301 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1617 K16732 - gmx:100777734 1392.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g1617 10 42709154 42714658 Gso10g1617 10 42709154 42714658 ECH