Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1603 ATGAGGCTGCCACAACTAAACTTGTTCTTAGTGTCATTTTTGTTGCTCTTTGTTGCCAGAGCAAATGGTTCTCTGCTCCCATTCATAGATCCTCCCACCACTCTCTTGGCTGATCTCTGGTCCGATCGCTTCCCGGACCCGTTTCGAGTGCTGGAACAGATTCCATTTGGTGTTGACAAAGATGAACCCTCCATGGCTATGTCACCTGCTAGAGTGGACTGGAAGGAGACACCAGAGGGGCATGTTATAATGCTGGACGTGCCGGGGCTGAAGAGAGAAGAGATAAAGATAGAGGTGGAGGAGAATAGGGTGCTGAGAGTGAGTGGTGAGAGGAAGAAGGAAGAGGAGAAGAAAGGGGATCACTGGCATAGAGTGGAGAGGTCCTATGGCAAGTTCTGGAGGCAGTTCAGGTTGCCACAAAATGTGGACTTGGATTCTGTTAAGGCTAAGATGGAGAATGGGGTGCTCACTTTGACACTTGACAAGTTGTCACCTGATAAGATCAAAGGTCCCAGGTTGGTCAGCATTGCTGGAGAGGATCAGCAACAAGGTAACCTCAACAGTGATGGGGTCAAGCAGGAGCTTTGA 588 0.4932 MRLPQLNLFLVSFLLLFVARANGSLLPFIDPPTTLLADLWSDRFPDPFRVLEQIPFGVDKDEPSMAMSPARVDWKETPEGHVIMLDVPGLKREEIKIEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKMENGVLTLTLDKLSPDKIKGPRLVSIAGEDQQQGNLNSDGVKQEL* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1603 195 Gene3D - 31 177 IPR008978 -
Gso10g1603 195 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 11 182 - -
Gso10g1603 195 MobiDBLite consensus disorder prediction 178 195 - -
Gso10g1603 195 ProSiteProfiles CS domain profile. 67 174 IPR007052 -
Gso10g1603 195 CDD ACD_ScHsp26_like 71 162 - -
Gso10g1603 195 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 61 179 IPR002068 -
Gso10g1603 195 Pfam Hsp20/alpha crystallin family 73 176 IPR002068 -
Gso10g1603 195 PANTHER 22.0 KDA HEAT SHOCK PROTEIN 11 182 - -
Gso10g1603 195 MobiDBLite consensus disorder prediction 173 195 - -
Gso10g1603 195 SUPERFAMILY HSP20-like chaperones 63 169 IPR008978 -
Gso10g1603 195 Coils Coil 97 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1603 Gso-Chr10 42578915 42579993 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1603 K13993 - gmx:100500319 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g1603 10 42578915 42579993 Gso10g1603 10 42578915 42579993 ECH