Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1517 ATGGATTTAGTTTCTGAATCAAAAAACGTCGTTTCAAACGTTACAAACCCCAGCAGCAGGTACAAGATGGAGACAGTACCCACCCCGACCACCACGAATCATCCAACGACGGCGGCGGCAGTGTCGTCGCCGTCTTCGGGAAGCAACAACAGCGGGAGCACTACTACTCCGAGCCGCTACGAGAACCAAAAGCGAAGGGACTGGAACACGTTCTGCCAGTACCTGAGGAACCACCGTCCGCCACTCTCCTTGGCCTTGTGCAGCGGTGCGCACGTGCTGGAATTCCTCCACTACCTCGACCAGTTCGGGAAGACTAAGGTTCATAACCACCCTTGCCCGTTCTTCGGTCTCCCCAACCCACCTGCCCCATGTCCCTGCCCGCTCCGCCAAGCCTGGGGCAGCCTCGACGCCCTCATCGGCCGCCTCCGCGCCGCCTACGAGGAGAACGGCGGCCGCCCGGAGACCAACCCCTTCGGCGCACGCGCCGTCAGGATTTACCTTCGCGATGTTCGCGATTTTCAGGCAAAGGCGAGAGGTGTTAGCTACGAGAAGAAGAGGAAGAGGCCAAAGCCTAAGGTCACTCCCACTCCTACTTAA 597 0.5913 MDLVSESKNVVSNVTNPSSRYKMETVPTPTTTNHPTTAAAVSSPSSGSNNSGSTTTPSRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLHYLDQFGKTKVHNHPCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQAKARGVSYEKKRKRPKPKVTPTPT* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1517 198 MobiDBLite consensus disorder prediction 1 62 - -
Gso10g1517 198 Pfam ALOG domain 54 172 IPR006936 -
Gso10g1517 198 MobiDBLite consensus disorder prediction 178 198 - -
Gso10g1517 198 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 30 194 - -
Gso10g1517 198 MobiDBLite consensus disorder prediction 1 59 - -
Gso10g1517 198 PANTHER PROTEIN G1-LIKE2 30 194 IPR040222 -
Gso10g1517 198 ProSiteProfiles ALOG domain profile. 59 186 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1517 Gso-Chr10 41633672 41635406 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1517 - - gmx:100791424 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1697 20 47603899 47605824 Gso10g1517 10 41633672 41635406 GST