Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0301 ATGTTTAACAAGCCAAGAGGTGCTAGTGCTTTTAATGTATTGAATTGGAAACGTCAAGGTGAATCATCTGTGACAACAGGTTTACTTCAGGATGTTCCACCAGAGATTGAATTGTCGGATTATAGAAGGATCCCAAGTCCAGGTAGTGAGAGCCCTTCAGACCTACTTAATGGTGAGAGCCTAAATGTAGAACCCATTGCTGATTTGGATTTCTTCTTCGAAAGGCTTTACAGCTACTACTGTGAGAAAGGGCTCTGGTGCATCATCATAAAGTGGATAGTTGAACTTCTGAGTCTTGGTTTCACCATATGTTTTTCGGGTTTTTTCTTACTATATGTTGACTGGAATGGGCTCCGAAATGCAAAGTGTGGGATGAATGCAGTTGAATCTGGAAGGAAGCCTTGTGATCTTGCTAAAGAAGCTCTTCATGAGCACCCTTTAACCCCATTTACACTTAGCAAAGCTATTATTGTTGGATACTTGGGAATATTTTCTATCTATTGGATATTTTGCTTCTTGAGATTCTTTGTTCAACTAAAGGATACTTTGGATATCCGACAGTTTTACTACAATAATCTCCGTGTTACTGATAATGATATTCAAACCATGCCCTGGGCTACAATTCTTGAAAAGGTTGTTCTTGTGCAAAGCTCACGACAACTCTGTGTGGTAAAGGATCTTTCTGCTCATGACATGGTAATGAGGTTGATGCGGAAGGAGAACTACTTGATTGGAATGCTCAACAAGGGTGTGCTTTCTTTCCCCATTTCTCAGTGGGTCCCAGGTGCTGGACCTACAGTGAAATCTGGTACTAATGGCACACAATATCGTCTAATGCTTCCCAAGACCCTTGAGTGGACTTTGAACTGGTGCATCCTGCAAAGCATGTTTGATCGAAACTTCTGTGTCAGAAGAGATTTTGTGTCAAATCCAAAGACATTAAAGAAAAGGCTTATGATAGTTGGGATTGTAATGCTTTTACTTTCTCCATTTCTTGTCATATTCATGCTGGTATATCTCTTTCTGAGGCACGCTGAACAATTTTATAATCACCCAAGCACAGCATCATCTCGAAGATGGTCAAATTTGTCACGATGGGTCTTTAGGGAATTCAATGAGGTGGATCATCTCTTCAGGCACCGGATTAATAGCAGTGTATTACATGCTTCTAACTATATCAAGCAATTTCCTTCACCTATCATATCTATCATTTCAAAATTCATATCATTTGTATCGGGTGGCTTTGCTGCAATTCTGATCATCATTGCTTTTATAGAGGAGTCTCTGCTGGAGGGTCATATATTTGGTCGGAACTTGTTCTGGTATGCTGCTGTTTTTGGAACTATAACTGCTATTAGACGGGCTGCAATTGCAGATGAGCTTCTAGTCATAGACCCCGAAGGAGCAATGTCAATGGTAGTTGAGCATACGCATTATATGCCCAAGAGATGGCGGGGCAAAGAAAGTACTGAAATGGTCCGGATTGAGTTTGAAACCTTATTCCAGTATAGTGGGATGATGTTACTTGAGGAGATGGCCTCGATTTTCCTTACTCCATACTTACTTCTGTTGGTTGTCCCAAAGCGGGTTGATGATATCTTGCAGTTTATTGCAGATTTTACTGTAGATGTTGAAGGTGTTGGTCATGTTTGCAGTTATAGTGTCTTCAATTTTCAAGAGCATGGAAACAGTAATTATGGTTCTCCGTTTAATGCACCTCGCAGCCAGAGAAGTTCCCAGGGGAAGTTGGAGAAATCATTTTTGAGCTTTCAGAGTAGTTACCCTTCATGGGAACCAAATGCTCAAGGGAGGCAGTTTCTGCATAATCTGAGAACATTCAGAGACCAAAACTTAGCAGGACACATAAACCAACATGGGTTTTCCCCTCCTAGACTGTGGAGAGGCAGTCCCAACATGGGAAGCAATGGAGACAGAAACAGGTTTACATCCAGGGAAATGCCATATAGTACTTTTGCAACTGGCAATCATTTGGGTTCTTTGTGGCTAATTGAATCCAGAAATCAAAACAATCATCCCTATCTTCTTGATTGGTACTACACTTCCCAACCTCATGATACAGCTCAAAGACATGTTCAAGCTGATGATCCATTTGAAGTAACGGAGCATCAATTCCCAGATTGGATGCCCTCTATCTTGGTACAAAATGAGCAACACGGGCATGAAGGATACATAAACGAGTATTGTGATGAACGCGCCGCTTCCCATCTCGAGGCTTCCACATCAGCTCCCATCTTCAGGGAAAGCCTAAGTCAGGATCAACATTCCATTGATATGCCCCTCACTGCCAGGAGTCGTTGGTGGGCAAGAAGTGATCCCCAGAGTGGACAAGGTCAGACAAGCTTTTTTGAGCCACCAGATTTCAATCACCAACCAGTATACAATTACCATGATAATAGAGGGTCAGAGGATCAAGATCAAGAACAACACTTGTACTGGGGAGATTATCACAAATTATCTAGTACAGCACATGCAGATGATTTATATGCAGGAGAATTCAATCTTCTTTTTGATGATGTTTATAGCAGTCCTCCAGAAAATCCCACTGTAAATCCTAGCACTGCAACCTTTTAA 2592 0.4147 MFNKPRGASAFNVLNWKRQGESSVTTGLLQDVPPEIELSDYRRIPSPGSESPSDLLNGESLNVEPIADLDFFFERLYSYYCEKGLWCIIIKWIVELLSLGFTICFSGFFLLYVDWNGLRNAKCGMNAVESGRKPCDLAKEALHEHPLTPFTLSKAIIVGYLGIFSIYWIFCFLRFFVQLKDTLDIRQFYYNNLRVTDNDIQTMPWATILEKVVLVQSSRQLCVVKDLSAHDMVMRLMRKENYLIGMLNKGVLSFPISQWVPGAGPTVKSGTNGTQYRLMLPKTLEWTLNWCILQSMFDRNFCVRRDFVSNPKTLKKRLMIVGIVMLLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSRRWSNLSRWVFREFNEVDHLFRHRINSSVLHASNYIKQFPSPIISIISKFISFVSGGFAAILIIIAFIEESLLEGHIFGRNLFWYAAVFGTITAIRRAAIADELLVIDPEGAMSMVVEHTHYMPKRWRGKESTEMVRIEFETLFQYSGMMLLEEMASIFLTPYLLLLVVPKRVDDILQFIADFTVDVEGVGHVCSYSVFNFQEHGNSNYGSPFNAPRSQRSSQGKLEKSFLSFQSSYPSWEPNAQGRQFLHNLRTFRDQNLAGHINQHGFSPPRLWRGSPNMGSNGDRNRFTSREMPYSTFATGNHLGSLWLIESRNQNNHPYLLDWYYTSQPHDTAQRHVQADDPFEVTEHQFPDWMPSILVQNEQHGHEGYINEYCDERAASHLEASTSAPIFRESLSQDQHSIDMPLTARSRWWARSDPQSGQGQTSFFEPPDFNHQPVYNYHDNRGSEDQDQEQHLYWGDYHKLSSTAHADDLYAGEFNLLFDDVYSSPPENPTVNPSTATF* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0301 863 Pfam Autophagy protein ATG9 63 557 IPR007241 GO:0006914
Gso10g0301 863 PANTHER APG9 AUTOPHAGY 9 1 855 IPR007241 GO:0006914
Gso10g0301 863 PANTHER AUTOPHAGY-RELATED PROTEIN 9 1 855 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0301 Gso-Chr10 3224050 3231114 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0301 K17907 - gmx:100779344 1741.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1358 19 42353749 42361320 Gso10g0301 10 3224050 3231114 PCT
Gso3g1362 3 39558973 39566473 Gso10g0301 10 3224050 3231114 PCT
Gso10g0301 10 3224050 3231114 Gso19g1358 19 42353749 42361320 PCT
Gso10g0301 10 3224050 3231114 Gso3g1362 3 39558973 39566473 PCT