Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma20g02225 | ATGGACGGTGATTCCTCTTGGAGTGCTCGTCTCTCTTCCGCTTCCAGGCGCTACCAATCCGCTCTTCAATCTCGATCAGACATGTTCATGGGTTTTGATGAAAATGATGGGGACGATGATATAAGGGAGGAGTTTCTCTGCCCATTTTGTTCTGAGTATTTTGATATCGTTGGATTATGCTGCCACATTGACGAAGAGCATCCAATGGAGGCAAGAAATGGGGTATGTCCTGTTTGTGCGTTGAGGGTGGGGGTTGATATGGTAGCACATATAACCCTACAACATGGGAGTATATTTAAGATATCCTTTTTTTTAGAACGCAAGAGGAAATCACGGAAAGGTGGATCTTATTCAACACTATCTTTATTGAGGAAGGAACTGCGAGAAGGAAATTTACAATCCCTTTTTGGCGGATCTTCATGTATAGTGTCCTCATCCAATGCAGATCCACTGTTGTCATCATTTATATTGCCTTTAGCGAATGAACATGCCAGCTCTCAGCCTCACTTACACACTGAGACAAGATCATCTAAAAAATGCTCAGATGAGACTGTATCAACAAGAAATGTGGAGACATCAACCTTGTCAGTTAAGGATAAGGAGGAGAAGGCAAAAAGATGCGAGTTTGTTCAAGGGCTGTTGCTGTCCACCATACTTGATGATAATTTATGA | 672 | 0.4226 | MDGDSSWSARLSSASRRYQSALQSRSDMFMGFDENDGDDDIREEFLCPFCSEYFDIVGLCCHIDEEHPMEARNGVCPVCALRVGVDMVAHITLQHGSIFKISFFLERKRKSRKGGSYSTLSLLRKELREGNLQSLFGGSSCIVSSSNADPLLSSFILPLANEHASSQPHLHTETRSSKKCSDETVSTRNVETSTLSVKDKEEKAKRCEFVQGLLLSTILDDNL | 223 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma20g02225 | 223 | Pfam | Stress-induced protein Di19, C-terminal | 120 | 218 | IPR027935 | - | |
| Gma20g02225 | 223 | MobiDBLite | consensus disorder prediction | 168 | 185 | - | - | |
| Gma20g02225 | 223 | PANTHER | PROTEIN DEHYDRATION-INDUCED 19 | 1 | 221 | IPR033347 | - | |
| Gma20g02225 | 223 | MobiDBLite | consensus disorder prediction | 166 | 185 | - | - | |
| Gma20g02225 | 223 | PANTHER | PROTEIN DEHYDRATION-INDUCED 19 HOMOLOG 4 | 1 | 221 | - | - | |
| Gma20g02225 | 223 | Pfam | Drought induced 19 protein (Di19), zinc-binding | 43 | 96 | IPR008598 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gma20g02225 | Gma-Chr20 | 49384051 | 49387091 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma20g02225 | - | - | gmx:100795155 | 412.92 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma10g01475 | 10 | 41864937 | 41867986 | Gma20g02225 | 20 | 49384051 | 49387091 | ECH | |
| Gma03g02000 | 03 | 45638758 | 45642131 | Gma20g02225 | 20 | 49384051 | 49387091 | ECH | |
| Gma19g02033 | 19 | 49279660 | 49283126 | Gma20g02225 | 20 | 49384051 | 49387091 | ECH | |
| Gma09g00361 | 09 | 3396260 | 3398688 | Gma20g02225 | 20 | 49384051 | 49387091 | ECH | |
| Gma15g01357 | 15 | 12115442 | 12118690 | Gma20g02225 | 20 | 49384051 | 49387091 | ECH | |
| Gma20g02225 | 20 | 49384051 | 49387091 | Gma20g02225 | 20 | 49384051 | 49387091 | ECH | |
| Gma10g01475 | 10 | 41864937 | 41867986 | Gma20g02225 | 20 | 49384051 | 49387091 | GST |