Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02002 ATGGAAGTGACAAGTGCTGTTCACCTTCACTCAGTTGGGTTTCTGCATTTACAGACACACGTTGAAAGGCTCAACGGTAGAGCTTTCTTCCTCTCCACAAGACCAAGAAAAGTGAAGGTTCATCTTCCTTGTCATCACCATCATCATCTAAACCACTTAAGCAATACCAACGGTATTGGTGCTTGCAGTGATAGAACAAGTGTTATACTCAACTCCACTTCTGTTACTTCCACAACTTCTTCTGCTGCGGGGTCCCTCTCTGAAGTGGAAAAGATAAAGCAGAAGTGCCTTACATGGcagtggaagggtcaatattccatcaactactttgtttcttctgattctcctcagcagttgcaTGGCAGCCACCCTCCTCTCTTACTTGTTCATGGCTTCGGTGCCTCCATTCCTCACTGGCGCAGGAATATCAGCACACTGGCCCAGAATTATACTGTTTATGCTATTGATCTTCTTGGTTTTGGGGCTTCAGATAAGCCTCCAGGCTTTCAATATACCATGGAAACATGGGCTCAGTTGATCTTGGATTTCTTGAATGAAGTTGTTCAGAAGCCAACTGTACTAATAGGAAACTCTGTTGGAAGCCTTGCTTGTGTCATTGCTGCCTCAGATTCAAGTCAAACTCTTGTTAGAGGCATTGTGCTGTTAAATTGTGCTGGTGGCATGAATAACAAAGCAATTGTTGATGACTGGAGGATCAAGTTACTATTACCCTTGCTTTGGCTGATTGATTTTTTATTAAAGCAAAAGGGAATTGCCTCAGCAATTTTTGGGCGCGTTAAACAAAGAGAGAATTTAAGAAATGTTTTGAGTTCAGTGTATGGAAACAAGGAGTCTGTGGATGAAGAACTGGTGGAGATCATTAGGGAACCAGCTAATGCTCCAGGGGCCTTAGATGCATTTGTTTCCATTGTAACGGGCCCGCCGGGGCCCAATCCGGTGTTGTTGATGCCAAAAATCTCCTTGCCTGTTTTACTTTTATGGGGAGATAATGATCCCTTTACTCCAATTGATGGACCTGTTGGCAAGTACTTTTCTTCATTGCCTTCTCAAAAAGAAAATGTTAAACTTTTCTTGCTTGAAGGGGTTGGACATTGTCCCCATGATGACAGGCCTGACTTAGTACATGAAAAATTGCTTCCCTGGTTGGCCAGTATTTCAAATTCAGAGTAA 1191 0.4081 MEVTSAVHLHSVGFLHLQTHVERLNGRAFFLSTRPRKVKVHLPCHHHHHLNHLSNTNGIGACSDRTSVILNSTSVTSTTSSAAGSLSEVEKIKQKCLTWQWKGQYSINYFVSSDSPQQLHGSHPPLLLVHGFGASIPHWRRNISTLAQNYTVYAIDLLGFGASDKPPGFQYTMETWAQLILDFLNEVVQKPTVLIGNSVGSLACVIAASDSSQTLVRGIVLLNCAGGMNNKAIVDDWRIKLLLPLLWLIDFLLKQKGIASAIFGRVKQRENLRNVLSSVYGNKESVDEELVEIIREPANAPGALDAFVSIVTGPPGPNPVLLMPKISLPVLLLWGDNDPFTPIDGPVGKYFSSLPSQKENVKLFLLEGVGHCPHDDRPDLVHEKLLPWLASISNSE 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02002 396 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 43 394 - -
Gma20g02002 396 Pfam Alpha/beta hydrolase family 126 382 IPR000073 -
Gma20g02002 396 PRINTS Alpha/beta hydrolase fold signature 149 164 IPR000073 -
Gma20g02002 396 PRINTS Alpha/beta hydrolase fold signature 330 344 IPR000073 -
Gma20g02002 396 SUPERFAMILY alpha/beta-Hydrolases 95 389 IPR029058 -
Gma20g02002 396 Gene3D alpha/beta hydrolase 70 391 IPR029058 -
Gma20g02002 396 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 43 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02002 Gma-Chr20 47282852 47285406 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g02002 126 396 Miscellaneous Gene Families AT1G80280 24.658 4.22e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02002 - - gmx:100775473 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g02002 20 47282852 47285406 Gma20g02002 20 47282852 47285406 ECH