Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01996 ATGGCATCATCATTTGTGGGTACTTTATTACCCAACCACTTCACACAAACCAAACACTCAGCTGTTCCTGCAAGTAGATCAGGTGCTCCAAGAAGGAGGAGAGTGCACTTAGCAACAACAAGAGCAGAGACCATGACTACTGTCATAGAAAAACTGGGCATTAAGATTGAGAGGAACCCTCCTGAGTCCAAGCTCACTCAACTGGGTGTTAGGCAATGGCCCAAATGGGGTTGCCCTCCAAGTAAGTTCCCATGGACATATGAAGCCAAAGAGACTTGCTATCTTCTGGAAGGAAAAGTGAAGGTCTTTCCTAGTGGGTCGAATGAGTCAGTTGAAATTGCTGCTGGTGACTTGGTTGTGTTTCCCAAAGGGATGAGTTGCACTTGGGATGTGTCTGTTGGTGTTGACAAGCACTATAATTTTGAATAA 429 0.4522 MASSFVGTLLPNHFTQTKHSAVPASRSGAPRRRRVHLATTRAETMTTVIEKLGIKIERNPPESKLTQLGVRQWPKWGCPPSKFPWTYEAKETCYLLEGKVKVFPSGSNESVEIAAGDLVVFPKGMSCTWDVSVGVDKHYNFE 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01996 142 Gene3D Jelly Rolls 40 141 IPR014710 -
Gma20g01996 142 PANTHER OS04G0445200 PROTEIN 26 142 - -
Gma20g01996 142 PANTHER OS04G0445200 PROTEIN 26 142 - -
Gma20g01996 142 CDD cupin_TM1112-like 73 141 - -
Gma20g01996 142 Pfam EutQ-like cupin domain 66 139 IPR008579 -
Gma20g01996 142 SUPERFAMILY RmlC-like cupins 61 139 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01996 Gma-Chr20 47241642 47243827 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01996 K06995 - gmx:100499968 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01996 20 47241642 47243827 Gma20g01996 20 47241642 47243827 ECH
Gma10g01646 10 43579770 43580535 Gma20g01996 20 47241642 47243827 GST