Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01702 ATGGCAACACATGAAATGGATCCCGATGTTGTTCGCTGGGGTCTTCATCTCCTAGATGTCTGCACACTTTCTCACCATGGTTCCCCTAGTATTGTAACTCAATATGATCCTGATTTAAGTCGAGTTGAATATGTTACCGAAGGCTTTTGTCAGCATGAGTACGTGGATAATGATGAGGCTGTTGCACGAGCATATCAAGAAGAATTATCGCAACTTGATTCCATGGGAGCTTCTGGGATATCCAATTTTGAGAATGAAGGAATGCAAGGATCTGTCTATACACAAGATTGGCCTCAATCCTCAAATGGAAATTATAACTTTGGCAATGAGTCTTGCCAGAACTCTGTAGATGAGTCCTATAATATGAAAGAAGTGGAGAATTATGGTCCAACTCCAAGTGAAAGAGAAAATGGCATGCATGAAAATGATGTTTATGGTTCGTCTTCTGGATCAGTAGAGGTACCTGTTATTAGTGATGACTTCTGGGATTCATTGGAAATATCGGATGAATCTTCTCTTGACGGTGAAGTTGGCAAAAGATTAAACCAGATGGTTCCCATTCCTCATGTTCCTAAAACCAATGAAAAAATACCATCTGATGATGAAGAAATATCAGATCATCAAAGGCTTCTAGACAGATTGCAGTTATATGATCTGATTGAATGCAAGGTTCAAGGAGATGGTAACTGCCAGTTCCGTTCTTTATCAGATCAACTCTATCGTTCTCCGGACCACCACAAATTTGTGCGGCAGCAAATTGTTCAACAGCTCAAATCTTACCCCGATCTATATGCTGGTTATGTTCCCATGGCTTATATTGACTATTTGAAAAACATGAGCAAGAGTGGCGAATGGGGTGATCATGTCACGTTGCAGGCTGCTGCAGATTGGTATGGTGTCAAAATTTTTGTTATTACGTCTTTTAAGGACACATGTTACATCGAGATTCTTCCACAGATACAGAAGTCTGGAAGAGTGATATTTCTGAGCTTTTGGGCAGAAGTTCATTACAACTCAATTTATCCGGAAGGAGAACTGCCCTCATCTCATACAAAGAAAAAGAAGAAATGGTGGAATTTCGGTGGCTAG 1089 0.4031 MATHEMDPDVVRWGLHLLDVCTLSHHGSPSIVTQYDPDLSRVEYVTEGFCQHEYVDNDEAVARAYQEELSQLDSMGASGISNFENEGMQGSVYTQDWPQSSNGNYNFGNESCQNSVDESYNMKEVENYGPTPSERENGMHENDVYGSSSGSVEVPVISDDFWDSLEISDESSLDGEVGKRLNQMVPIPHVPKTNEKIPSDDEEISDHQRLLDRLQLYDLIECKVQGDGNCQFRSLSDQLYRSPDHHKFVRQQIVQQLKSYPDLYAGYVPMAYIDYLKNMSKSGEWGDHVTLQAAADWYGVKIFVITSFKDTCYIEILPQIQKSGRVIFLSFWAEVHYNSIYPEGELPSSHTKKKKKWWNFGG 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01702 362 SUPERFAMILY Cysteine proteinases 201 342 IPR038765 -
Gma20g01702 362 Gene3D - 200 347 - -
Gma20g01702 362 PANTHER OTU DOMAIN CONTAINING PROTEIN 22 360 - -
Gma20g01702 362 Pfam OTU-like cysteine protease 225 311 IPR003323 -
Gma20g01702 362 ProSiteProfiles OTU domain profile. 219 343 IPR003323 -
Gma20g01702 362 PANTHER OTU-LIKE CYSTEINE PROTEASE DOMAIN CONTAINING PROTEIN 22 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01702 Gma-Chr20 44212585 44218036 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01702 - - gmx:100820379 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00522 10 5314288 5320950 Gma20g01702 20 44212585 44218036 ECH
Gma20g01702 20 44212585 44218036 Gma20g01702 20 44212585 44218036 ECH
Gma10g02006 10 47516202 47522851 Gma20g01702 20 44212585 44218036 GST