Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01666 ATGGTGTCAGGGAGCGACCCGGTTGAGTCTTTTTTCAATTCCGTTCAGGTTGTGAAGGATTCGCTGTCGCCACTTGAAGTGGGTATTCGCAAGGCGGCGAAGGATCTTGAGCATTGTTTGGCAGGGTCAAAGAACAAGGTCAATGGTGTTTGTTTGATTGCCCCAGTGAGGGAAAGTGGTGAATTTCAGATCTGTAATGTGAAGAAGAAGAAAGGGTTGTCAATGAAGGTTCCTTTGAAGGCTTTATGGGGCATGTTTTCACAGAATGGTACTGGTAATGGTGGTAGTAGTAATAGAGCTCAAGTGGGTAAGGAAGATGGACCCTCTTGCACCAATTGCTTGCAGTTTGCTGTGACTTGGTCTTTGTTGGTTAATGGGTTCCTTCAGTCTCTGCCACTTCCTTTCAAATCTGGGAAGAAGAAGTGTCAGAAAGTGTGTGATGAAGACAAGCTGTGTTCTTGCACGAAGCCTACTGTTTCATCATGTGAAGTGAAGCAAAATGAATCCAAGGGGGGTCAGTTTGGTAGAGCAGTTAGGGAGAAGGGTGTGAGGAGGAAGGATGGGAAAAATGTTTCACTTGAGTGCCTTATAGGTTTTATCTTTGATCAGCTATCTCAGACTCTTCAGAGTCTGGATTATGGGGTGCATGAAAACAATGATGACCTTGACAATGGGAAAACTAGTCTGCCCCAACCTTCTTTTTCTCATTTTGGTCATGTGAATGCACTCGCAGGTTTCTTGGAGGAGCACAAAGTATATGTGAATAGCTTCTTGGGGAATTTGAGGTTTGCAAAGGTGGGTGGTGTGCCATCAAGTGTGCCTGGAGAAGAAAGCCCTTCAACAAACGGAGAGGGAGATATTAGTAGTAACAATGGTAATAATGGTAATGGTAATAATGAAAACAAGGATGAAAACGGAGGAAATTCGCCGCAGAAGGTTGCCAACAACATATTCAGTATTCCTCTCTCTAACGTGGAGCGTCTAAAGTCTACACTTTCCACAGTTTCATTGACAGAATTGATTGAACTGCTACCGCAGCTGGGGAGAACATCCAAAGACCATCCTGATAAGAAGAAACTAATCTCAGTACAAGATTTCTTTAGATATACAGAGACTGAAGGGAGGAGGTTCTTTGAGGAGTTGGATAGAGATGGGGATGGCCAAGTAACTCTGGAAGATCTAGAAGTTGCAATGAGAAAAAGAAAGCTGCCACGAAGATATGCTAAAGAATTTATGAGCCGTGCTAGAAGTCACTTATTTTCCAGGTCTTTTGGTTGGAAGCAGTTCTTATCATTAATGGAACAGAAGGAGCCAACAATTCTTCGTGCATATACTTCTCTATGTCTAAGCAAGTCTGGGACACTGAAGAAGAGTGAAATATTGGAATCACTAAAGAATGCAGGACTCCCTGCAAATGAAGACAATGCTGTTGCTATGATGCGATTTCTGAAAGCAGACACAGAAGAATCTATTTCATATGGACATTTCCGCAATTTCATGCTTCTGCTTCCCTCTGATCGTCTTCAAGAAGATCCCAGGAGTATCTGGTTTGAAGCTGCGACAGTAGTTGCTGTTCCACCAGCTGTTGAAATTCCTGCTGGAAGTGTGCTGAGATCTGCATTGGCAGGTGGCCTTTCTTGTGCCCTGTCATGTGCATTACTGCATCCAGTTGATACAATTAAGACTCGAGTACAAGCATCAACAATGTCCTTCCCTGAAATAATTTCTAAGCTGCCAGAGATTGGAAGGCGGGGTTTATACAGGGGCTCTATCCCTGCAATTCTTGGACAGTTTTCAAGCCATGGCTTGCGAACTGGGATATTTGAAGCAAGTAAATTGGTGTTGATAAATATTGCTCCTACACTGCCAGAACTCCAGGTACAATCTGTGGCATCATTCTGTAGCACATTTTTGGGAACAGCTGTACGGATCCCCTGCGAAGTGTTGAAGCAGAGGTTACAGGCGGGTCTTTTTGACAACGTGGGCGAGGCTTTTGTTGCGACTTGGGAGCAGGATGGTCTTAGGGGTTTCTTTCGTGGAACCGGAGCTACCTTGTGCCGCGAGGTTCCATTTTATGTTGCTGGCATGGGGCTTTATGCTGAATCTAAAAAGGTTGCCGAACGACTACTAGAGCGGGAACTCGGTCCCTTGGAAACAATTGCTGTTGGAGCTTTATCTGGTGGCTTGGCGGCTGTTGTTACAACGCCGTTCGATGTCATGAAAACTAGAATGATGACTGCACAGGGCCGATCTGTGTCGATGACTTTGATAGCCTTCTCTATACTAAAACATGAGGGACCCCTTGGCTTGTTCAAAGGAGCAGTACCCAGGTTCTTTTGGATTGCTCCTCTAGGTGCTATGAACTTTGCAGGCTATGAGTTGGCAAAGAAGGCCATGAATAAAAATGAGGAGGGCAAGGCAGGCCGTTCAGAGTAA 2436 0.4479 MVSGSDPVESFFNSVQVVKDSLSPLEVGIRKAAKDLEHCLAGSKNKVNGVCLIAPVRESGEFQICNVKKKKGLSMKVPLKALWGMFSQNGTGNGGSSNRAQVGKEDGPSCTNCLQFAVTWSLLVNGFLQSLPLPFKSGKKKCQKVCDEDKLCSCTKPTVSSCEVKQNESKGGQFGRAVREKGVRRKDGKNVSLECLIGFIFDQLSQTLQSLDYGVHENNDDLDNGKTSLPQPSFSHFGHVNALAGFLEEHKVYVNSFLGNLRFAKVGGVPSSVPGEESPSTNGEGDISSNNGNNGNGNNENKDENGGNSPQKVANNIFSIPLSNVERLKSTLSTVSLTELIELLPQLGRTSKDHPDKKKLISVQDFFRYTETEGRRFFEELDRDGDGQVTLEDLEVAMRKRKLPRRYAKEFMSRARSHLFSRSFGWKQFLSLMEQKEPTILRAYTSLCLSKSGTLKKSEILESLKNAGLPANEDNAVAMMRFLKADTEESISYGHFRNFMLLLPSDRLQEDPRSIWFEAATVVAVPPAVEIPAGSVLRSALAGGLSCALSCALLHPVDTIKTRVQASTMSFPEIISKLPEIGRRGLYRGSIPAILGQFSSHGLRTGIFEASKLVLINIAPTLPELQVQSVASFCSTFLGTAVRIPCEVLKQRLQAGLFDNVGEAFVATWEQDGLRGFFRGTGATLCREVPFYVAGMGLYAESKKVAERLLERELGPLETIAVGALSGGLAAVVTTPFDVMKTRMMTAQGRSVSMTLIAFSILKHEGPLGLFKGAVPRFFWIAPLGAMNFAGYELAKKAMNKNEEGKAGRSE 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01666 811 ProSiteProfiles Solute carrier (Solcar) repeat profile. 534 614 IPR018108 -
Gma20g01666 811 Pfam Mitochondrial carrier protein 628 705 IPR018108 -
Gma20g01666 811 Pfam Mitochondrial carrier protein 714 802 IPR018108 -
Gma20g01666 811 Pfam Mitochondrial carrier protein 535 615 IPR018108 -
Gma20g01666 811 ProSiteProfiles EF-hand calcium-binding domain profile. 369 404 IPR002048 GO:0005509
Gma20g01666 811 ProSiteProfiles Solute carrier (Solcar) repeat profile. 623 705 IPR018108 -
Gma20g01666 811 MobiDBLite consensus disorder prediction 269 312 - -
Gma20g01666 811 MobiDBLite consensus disorder prediction 274 312 - -
Gma20g01666 811 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 121 803 - -
Gma20g01666 811 Gene3D Mitochondrial carrier domain 539 809 IPR023395 -
Gma20g01666 811 ProSitePatterns EF-hand calcium-binding domain. 382 394 IPR018247 -
Gma20g01666 811 ProSiteProfiles Solute carrier (Solcar) repeat profile. 714 798 IPR018108 -
Gma20g01666 811 Gene3D - 451 522 - -
Gma20g01666 811 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN-LIKE 121 803 - -
Gma20g01666 811 SUPERFAMILY Mitochondrial carrier 535 793 IPR023395 -
Gma20g01666 811 Gene3D - 297 439 - -
Gma20g01666 811 SUPERFAMILY EF-hand 375 504 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01666 Gma-Chr20 43780693 43788158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01666 1 805 EF-hand Containing Proteins AT2G35800 63.038 0.0 1019
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01666 - - gmx:100807197 1545.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01666 20 43780693 43788158 Gma20g01666 20 43780693 43788158 ECH
Gma10g02045 10 47965517 47977550 Gma20g01666 20 43780693 43788158 GST