Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01627 ATGAAGCTCCAAACACATCAACTGCTACTCTCCTTTGTGTTGTTCTCCGCTGTCATCATCTCCACAATTTCAGGAACCACCATCACCATCTCTCCGGGCACAACCCTATACGCTTCCAACACAACCCAATCATGGTCCTCTCCGAACGACACTTTCTCTCTCCACTTCCTCCCCCTCCACCCTCCAACTTTCCCTCCTTCCTTCACCGCCGCCGTTGTCCACTCCGGCGGTGCTCCCGCCGTCTGGTCGGCTGGAAACGGCGCTGCCGTCGACTCCGCCGCATCCTTCCAGTTCCTCCCCGCCGGCAACCTCGTCCTCGTTAACGGGTCGGGTTCCACCGTGTGGGACTCCGGAACTTCCAACATGGGTGTCTCCTCTGCCACCCTTCACGACAACGGAAACTTGGTTCTCTCCAATGCCACCAGTTCCGTGTGGTCGAGCTTCGACAACCCCACTGACACCATTGTTTCGTTTCAGAACTTTACTGTTGGTATGGTTTTGCGTTCTGGGTCGTTCTCATTTTCTGTTCTTAGTTCTGGGAACCTCACTCTCAAGTGGAGTGATAGTGTCCCTTACTGGGATCAAGGCTTGAACTTTTCCATGAGTGTGATGAATTTGAGTTCACCTGTTTTGGGGGTGGAACCAAAGGGGGTTTTGCAGCTTTTTTATCCCAATTTGAGTGCCCCTGTGGTGGTTGCTTATAGCAGTGACTATGGTGAAGGGAGTGATGTGTTGAGGGTTTTGAAGTTGGATGGTGATGGGAATTTGAGGGTTTATAGCTCTAAGAGGGGTAGTGGGACCGTGAGTTCAACATGGGTTGCTGTTGAGGATCAATGTGAGGTTTTTGGTTACTGTGGTCATAATGGTGTTTGTAGTTACAATGATTCTAGTTCTAGCCCCATTTGTGGATGTCCATCTCAGAATTTTGAGATGGTTAATCCTAGTGATAGTAGGAAAGGGTGTAGGAGGAAGGTGAGGCTTGAGGATTGTGTAGGGAAGGTGGCAATGTTGCAACTTGACCATGCTCAATTCTTGACTTATCCTCCTCAGTTTTTGATCAATCCTGAGGTGTTTTTCATTGGTATTTCAGCTTGCAGTGGAAATTGTCTTGCTTCTAATTCTTGTTTTGCTTCCACTTCCTTGTCTGATGGAAGTGGACTTTGTTACATAAAGACGTCAAATTTTATTAGTGGTTACCAGAATCCTGCTCTACCTAGCACTTCATATATCAAGGGTGGTTTATGGTTGTGGTGTTGTAGAAACAGGCAACGATTTGGAGGTTTTGCAGCTCAGTATACTCTTCTTGAGTATGCTTCTGGCGCACCGgaacaaccatctcataggccaacaatgagcaaagtggtgcaaatgctagaaggTGTGATAGATATTGAGAGGCCACCAGCCCCAAAAATCAATAGCAATGCCGCTCCTATCTCCACTATTGCAACTTCATCAGCTCCAAATTACTCCTCATCTTCATCTTTGTTTACTTTTGAGGCTTCTCCCTTGGCTCTTGCAATATCCTAG 1530 0.4601 MKLQTHQLLLSFVLFSAVIISTISGTTITISPGTTLYASNTTQSWSSPNDTFSLHFLPLHPPTFPPSFTAAVVHSGGAPAVWSAGNGAAVDSAASFQFLPAGNLVLVNGSGSTVWDSGTSNMGVSSATLHDNGNLVLSNATSSVWSSFDNPTDTIVSFQNFTVGMVLRSGSFSFSVLSSGNLTLKWSDSVPYWDQGLNFSMSVMNLSSPVLGVEPKGVLQLFYPNLSAPVVVAYSSDYGEGSDVLRVLKLDGDGNLRVYSSKRGSGTVSSTWVAVEDQCEVFGYCGHNGVCSYNDSSSSPICGCPSQNFEMVNPSDSRKGCRRKVRLEDCVGKVAMLQLDHAQFLTYPPQFLINPEVFFIGISACSGNCLASNSCFASTSLSDGSGLCYIKTSNFISGYQNPALPSTSYIKGGLWLWCCRNRQRFGGFAAQYTLLEYASGAPEQPSHRPTMSKVVQMLEGVIDIERPPAPKINSNAAPISTIATSSAPNYSSSSSLFTFEASPLALAIS 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01627 509 Pfam D-mannose binding lectin 81 163 IPR001480 -
Gma20g01627 509 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 443 501 - -
Gma20g01627 509 PANTHER OS07G0415500 PROTEIN 443 501 - -
Gma20g01627 509 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 12 411 - -
Gma20g01627 509 SMART blect_4 36 151 IPR001480 -
Gma20g01627 509 ProSiteProfiles Bulb-type lectin domain profile. 152 271 IPR001480 -
Gma20g01627 509 ProSiteProfiles Bulb-type lectin domain profile. 21 150 IPR001480 -
Gma20g01627 509 Gene3D - 150 273 IPR036426 -
Gma20g01627 509 Gene3D - 21 149 IPR036426 -
Gma20g01627 509 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 196 IPR036426 -
Gma20g01627 509 PANTHER OS07G0415500 PROTEIN 12 411 - -
Gma20g01627 509 ProSiteProfiles EGF-like domain profile. 275 315 IPR000742 -
Gma20g01627 509 Pfam S-locus glycoprotein domain 241 305 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01627 Gma-Chr20 43364803 43367265 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01627 - - gmx:100810753 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01627 20 43364803 43367265 Gma20g01627 20 43364803 43367265 ECH