Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01624 ATGTGTAGTATGTGCCATTATTGTGGTGTGGGCTTGACAGAATCAAATTTTGACAACAAGAAACAGGGAAATGAGAGTAGTCTAAAGTTGAATGGTAAAGTTTCCATTAGGCCTTGCAAATCTTGTGGAGAGAAGCTAGAGCGAGCAAATGCGAAATGGCATAGTACAAGTCCATATGCAACACCACTTATCAGTCCAACTATGTCATTGCTAAGTACTGATAGCTGTATCTCCACTTGCAGTAATTACTATCCCTCTCTATGCTCAAATACTTGCTTTGTTTCTTCTATTAGGAATAGTCAAGAAGAAAGTTCAGTTGAAGGCATTGTGGAAGAGCTTGATTATAAGTTGAATGGTTCACAAAAAGTGATGGAAAACAATAACAACAATGAGGGTTACACAGTGAGAGATGTGGAGATTGCACAAAACTTTCAAGAAGTAAAAGCTGATTTTTCTGAAGAACCTATTGCATCCTCTGCTGTCGAAGAAGCTGAATATTCTCTTCCTGATGATTTGGATGTCCAAACTTGGGAACCTCCTGAGCCAGAAAACCCACAGGATGATATGGAAAATAGTGTGACTTGTAATGACGATGATGAAGACCAGGGCCTAGGGATTGCAAACTGGGGTGAGCCTACCTCTATGAGTAGTTCTGAGGATGAATTAAGTGGGAGCTATAGGTTCAAAGAGGAAAAACAAAAAGCAATGGAAGAAGTAATGAATGGGAAATTCAAGGCACTTGTTGGTCAGCTTCTTAAATCTGTGGGAGTTTCCTCTTCTGATGAAGGTGATAAGAGTTGGGTGGACATAGTTACATCTTTATCATGGGAAGCTGCTTCTTTTTTGAAGCCTGGTGCAATTGGAGGTAATGCAATGAATCCTGATGGATATGTTAAAGTGAAGTGCATTGCTGCTGGTTCCCGCAGCCAAAGTCAACTAATCAGAGGTTTGGTCTTCAAAAAACATGCTGCTCACAAGCATATGCCTACTAAGTATAAAAATCCAAGATTATTACTGATTAGCGGTGTGCTTGGCCATTCTATCAATGGACTGTCTTCCTTTGACTCCATGGACCAGGAGAAAGATGATCTGAAATCTAAAATGGATCGTATAGAAATGTGCCATCCAAATGTTATATTAGTGGAGAAAACTGTTTCTCGTGATATACAAGAGTCAATTTTGGCAAAGGGAATGACACTTGTGCTTGATATGAAGCTTCATCGTCTAGAAAGAGTTGCACGTTGTACTAGTTCACCAATTTTATCATGCGATAATTTGAACGGTCAAAAGCTAAGACACTGTGACTTTATCTATTTTGAGAAGTTTGTGGAGGAACATGATGCTGTTGGTGAAGGAGGAAAGAAGCCCATCAAGACTTTGATGTTCATTGAGGGCTGTCCTACACGTTTGGGCTGCACGATTTTACTGAAAGGTACACACAGTGATGAACTGAAGAGGATCAAATGTGTCATACGGTGTGCAGTTGTCATGGCATATCACTTGATCCTTGAAACCTCTTTTCTTGTTGATCAGAAAGCAATGTTCTCTACCATTCCTGCTGTGAGTGTAGCAGATATCTTGCCAACTGATAAAAAATCCTGTGATTCAGCATCCATTAATTCAAGCATTCCATCTCTTGAGTATTCTGCTGAGAATGGAATAGTTAGTACTGATATTCCCATATGCAGTGGACTTCATGAAAAAAACACCAATGGTTTAAACCTTGGATCGGAGGAGTTTTCCCAATTCTCTTGTGAACCATATAATCCAGCCGTCTTTTCTGGGTTCTCAGCTATTTCATCTTCTCTTAAGAAGGTTATGGGGGACAGTTTTCCCTTTGCATCTTCCGCTCCTTATCAATCTTTATCAGCATACTTTGGCTTCAATGGAAGGAAACCTGATGGTATGGTTAATGAGTCAATTTCTGTTTTAAACTCTCTAGAGGCTGATGAAACTACCACGATGGAAGCGAAAAGTCATTCTAATGAAGTGAAGTTACTTAATGGTGGACAATCCCTGTCTTCACCTGTGCACTTAGATTCCAATGGGAATATAAGTAAAGATGATGGAAATAATAGAAAAGAACTCCAAAGTAAAGATGATATCAATGCCGTGTTGGATTCTCAGAGTATTTTGGTCTTGATGTCTAGCCGGAATGCCTTAAGAGGGACTGTATGCCAGCAAAGTCATTTTTCACATATTATGTTCTACAAGAATTTTGATATTCCACTTGGAAAGTTTCTGGAGGAAAACTTACTCAATCAGACAAGACTTTGTGATGCTTGTCAAGAACTGCCAGATGCTCACTTTTATTATTATGCTCATCACTATAAACAGCTTACTATACAAGTTAAACGCTTGCCCCAGGAAAAAAGTTTGCTTGGAGAGGCAGAAGGGAAAATTTGGATGTGGAGCCGTTGTCGAAAATGCAAGTCTGGTTCTACAAAGAGAGTATTGATATCCACCACTGCCCGTAGTTTATCATTTGGAAAATTTTTGGAGCTTAGCCTTTCTCACTATTCTTCTAGCAGAAAATTGAGTTGTGGACATTCTCTTGATAGGGATTTTCTCTACTTCTTTGGATTAGGTCACATGGTTGCAATGTTCAGATATTCATCTGTTGCCACATATACTGTGTCTATGCCTCCTCAAAAGCTAGAATTCAGTGGTGCAATAAGACAAGAGTGGCTTTCAAAAGAGACCCAGAATGTGTATATGAAAGGCATAACATTATTCACCGAAGTTGCAAACTGTTTGAAGACAATACAATTTGATGGCCTTGGAGGATCAATTAGAGATTTCTCTGAGGTTGAGAAAATGTTAAAGCAAGAGCAAGAAGAATTTGAGGCAAACATCAAGACTGTTGTTGCTAAAAAGGGGGATCCAGATCAGGCTGCCTTCAAACTTCTCAGTTTAAACCGATTGATGTGGGATCTTTTGATTAAATCCTATGTGTGGGTTCGGCGCTTGTACCCATTACACTCATCTGATGTCTCTGAGAAAGTTATGCAAGAACACGATTATTCAAAGGTGGAAGGTACTGCTAGTAGAGAAACTGGGTCTATGGGTAATTTTATTGAAGATGGGAATGCCAATGTAAAAATTATGTTTGACACATCTAAGCAAGTAAATGAACTACCAATAAAGGAAATTCCTATCAGTGGGCCTCTTCTAGAGTGCAATGAACAGGCTCATCCATCTAACACACAGAATGAAAGGATACCAATTGTTGATGATTTGAGATCAAGGAGATTGTCTGACCAAAAGTTGAATTTGAGTCTGGATGTTATACCAACTCATCTTGAAGTAGGTGCAAATTCTTCAGGTTCTACAGATATTCAAACTAATCATTTGGTTTCTGATTTCAAGATATTAAACAAAAGTGCTTCCTTGCATTCACCAATTTCTAACATGCTGGATTCAAATGATTGGTTCTGGAAGCCATTTGCTGACATTCGGCAGATAGGCATAAGGGAACTCCAGAAAAGATTATTGCCAAAATTTGAATCTGTAAGCTGCTCTATTGCTGAATATATACCCACAGCAAATCAATTAATCACTGAGGAAGGTACAAGGTTGCATATCCCTCTCAAGACTGACAATCATGTTGTGTCTGACTTCGAGGGTGAACCCTCAAGCATAATTGCTTGTGCACTTGCGTTATTGAAAGATGCATATGAGGTGTCAGAAGTTGATGATGAGGATGACAGAAACGAAAGTGGAATAACTTCAAACTCAACAGAAAGTTTGCATGGCTTGACCCATGGCGCTACCTTAACTTCTTCACACTCATTTTCAAGAAGTTCTTCAGATTCAGATTCTGTGCATTCAGCAGGAAGCACTTCTTCAGAGGAGTCACGAGCCTCTCGTGCTACAGAAAACCATAGCATAGAGATTGCTATGGGTTATGCAAAATCACTTGGGAGGGAAAAATATTCAGTGATATGTCATTATTTTAAGCAGTTCCGTGAACTTAGAAATTGGTGTTGCCCATCTGAGCTTGATTTTATTGCTTCTTTAAGCCGCTGTAGGAATTGGGATGCCAAAGGTGGAAAAAGCAAGTCCTATTTTGCAAAAACACTTGATGACAGATTCATCATAAAAGAGATTAAGAAGACAGAACTTGATTCATTTTTGGGGTTTTCTTCTCTGTATTTCAAACACATGAGAGAATCATTTGAATTTGGCAGCCAAACTTGTCTTGCAAAAGTCTTGGGGATATATCAGGTTACTAAAAGACACGTCAAAAGTGGAAAAGAGGTTAAATATGACCCCCTCATGGTGATGGAAAATCTTACCTACAATAGAAATATTACACGCCAGTATGATCTTAAAGGTGCTCTTTATGCCCGGTACAATTCTGCTGCCGATGGTGCTGGAGATGTTCTTTTGGATCAGAACTTTGTGAATGACATGAATTCTTCCCCATTATATGTCAGCCATAAAGCAAAACGTGTTCTTCAACGTGCTGTTTGGAATGACACATCTTTTCTGAATTCAATCAATGTGATGGATTACTCCTTGCTTGTTGGAGTAGATTCTCAGAAGCACGAGCTTGTCTGCGGGATCATTGATTATCTCAGGCAGTATACTTGGGACAAACATCTTGAGACATGGATGAAGTCTTCACTTGTTGTGCCAAAAAATGTGTTGCCAACTGTAATCTCTCCTAAAGAATACAAAAAGAGGTTCAGAAAGTTTATGTCTACATATTTTTTGAGTGTTCCAGATCACTGGTGTTCCCAGAAATCCTCCAATCCTTGCAAACTTTGTTGCTCAGGGGAAGATGACCCTTCCCAGCAAAAGCCCTAG 4812 0.3928 MCSMCHYCGVGLTESNFDNKKQGNESSLKLNGKVSIRPCKSCGEKLERANAKWHSTSPYATPLISPTMSLLSTDSCISTCSNYYPSLCSNTCFVSSIRNSQEESSVEGIVEELDYKLNGSQKVMENNNNNEGYTVRDVEIAQNFQEVKADFSEEPIASSAVEEAEYSLPDDLDVQTWEPPEPENPQDDMENSVTCNDDDEDQGLGIANWGEPTSMSSSEDELSGSYRFKEEKQKAMEEVMNGKFKALVGQLLKSVGVSSSDEGDKSWVDIVTSLSWEAASFLKPGAIGGNAMNPDGYVKVKCIAAGSRSQSQLIRGLVFKKHAAHKHMPTKYKNPRLLLISGVLGHSINGLSSFDSMDQEKDDLKSKMDRIEMCHPNVILVEKTVSRDIQESILAKGMTLVLDMKLHRLERVARCTSSPILSCDNLNGQKLRHCDFIYFEKFVEEHDAVGEGGKKPIKTLMFIEGCPTRLGCTILLKGTHSDELKRIKCVIRCAVVMAYHLILETSFLVDQKAMFSTIPAVSVADILPTDKKSCDSASINSSIPSLEYSAENGIVSTDIPICSGLHEKNTNGLNLGSEEFSQFSCEPYNPAVFSGFSAISSSLKKVMGDSFPFASSAPYQSLSAYFGFNGRKPDGMVNESISVLNSLEADETTTMEAKSHSNEVKLLNGGQSLSSPVHLDSNGNISKDDGNNRKELQSKDDINAVLDSQSILVLMSSRNALRGTVCQQSHFSHIMFYKNFDIPLGKFLEENLLNQTRLCDACQELPDAHFYYYAHHYKQLTIQVKRLPQEKSLLGEAEGKIWMWSRCRKCKSGSTKRVLISTTARSLSFGKFLELSLSHYSSSRKLSCGHSLDRDFLYFFGLGHMVAMFRYSSVATYTVSMPPQKLEFSGAIRQEWLSKETQNVYMKGITLFTEVANCLKTIQFDGLGGSIRDFSEVEKMLKQEQEEFEANIKTVVAKKGDPDQAAFKLLSLNRLMWDLLIKSYVWVRRLYPLHSSDVSEKVMQEHDYSKVEGTASRETGSMGNFIEDGNANVKIMFDTSKQVNELPIKEIPISGPLLECNEQAHPSNTQNERIPIVDDLRSRRLSDQKLNLSLDVIPTHLEVGANSSGSTDIQTNHLVSDFKILNKSASLHSPISNMLDSNDWFWKPFADIRQIGIRELQKRLLPKFESVSCSIAEYIPTANQLITEEGTRLHIPLKTDNHVVSDFEGEPSSIIACALALLKDAYEVSEVDDEDDRNESGITSNSTESLHGLTHGATLTSSHSFSRSSSDSDSVHSAGSTSSEESRASRATENHSIEIAMGYAKSLGREKYSVICHYFKQFRELRNWCCPSELDFIASLSRCRNWDAKGGKSKSYFAKTLDDRFIIKEIKKTELDSFLGFSSLYFKHMRESFEFGSQTCLAKVLGIYQVTKRHVKSGKEVKYDPLMVMENLTYNRNITRQYDLKGALYARYNSAADGAGDVLLDQNFVNDMNSSPLYVSHKAKRVLQRAVWNDTSFLNSINVMDYSLLVGVDSQKHELVCGIIDYLRQYTWDKHLETWMKSSLVVPKNVLPTVISPKEYKKRFRKFMSTYFLSVPDHWCSQKSSNPCKLCCSGEDDPSQQKP 1603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01624 1603 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1249 1572 IPR002498 GO:0016307|GO:0046488
Gma20g01624 1603 SUPERFAMILY SAICAR synthase-like 1310 1572 - -
Gma20g01624 1603 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 166 1600 - -
Gma20g01624 1603 CDD Fab1_TCP 245 511 - -
Gma20g01624 1603 Pfam TCP-1/cpn60 chaperonin family 249 505 IPR002423 GO:0005524
Gma20g01624 1603 PANTHER 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1D-RELATED 166 1600 - -
Gma20g01624 1603 MobiDBLite consensus disorder prediction 1230 1291 - -
Gma20g01624 1603 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1519 1570 IPR002498 GO:0016307|GO:0046488
Gma20g01624 1603 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1349 1516 IPR002498 GO:0016307|GO:0046488
Gma20g01624 1603 Gene3D GroEL 309 478 IPR027409 -
Gma20g01624 1603 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1258 1431 IPR027484 -
Gma20g01624 1603 CDD PIPKc_PIKfyve 1311 1572 IPR044769 GO:0000285
Gma20g01624 1603 Gene3D - 1432 1573 - -
Gma20g01624 1603 MobiDBLite consensus disorder prediction 172 224 - -
Gma20g01624 1603 MobiDBLite consensus disorder prediction 1242 1287 - -
Gma20g01624 1603 SUPERFAMILY GroEL apical domain-like 310 478 IPR027409 -
Gma20g01624 1603 SMART PIPK_2 1287 1573 IPR002498 GO:0016307|GO:0046488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01624 Gma-Chr20 43331742 43340096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01624 328 1585 Acyl Lipid Metabolism Gene Families AT1G34260 47.840 0.0 1089
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01624 K00921 - gmx:100809696 3127.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01624 20 43331742 43340096 Gma20g01624 20 43331742 43340096 ECH
Gma10g02090 10 48440241 48448662 Gma20g01624 20 43331742 43340096 GST