Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01619 ATGTCGTTTGGCAAGAAACTGTTCCTCCAAATTCTGTGGTGGTTTTCCTTGATCGGTCTTAGTTCCCAAAGACGGAGTCATTACAGTTTTGTTGTGAGAGAGGCCAATTATACAAGACTCGGTTCAACAAaaagcatattgacagtgaatgggaattttccaggaccaactatcaaagtccacagaggagaaacaatctttgttaatgtttataacaagggcaactacaatatcactttgcactggcatggagtgaagcagccaaggaatccatggacagatggtcctgcatacatcactcagtgccccatacaacctggaaggagattcagacagaagttgattttttctacagaggaagggaccatatggtggcatgctcatagtgactggtcaagagccactattcatggggctatctttgtctatccaaccaagaatacaccctacccttttCCCAAACCTCATGCAGAGATTCCCATCATATTTGGAGAATGGTGGAAGAGTGATATCAATGAGGTGTTCACACAATTTATTGAATCTGGAGGAGGCCCAAATATATCTGATGCTCTCACGATAAATGGTCAACCTGGGGATTTGTACCCTTGCTCAATGGCAGAAACGTTCGAGTTTCATGTAGAGCAAGGCAGGACTTATCTTCTCCGTGTTGTCAATGCGGCAATGAATCTCATTCTCTTCTTCTCTGTTTCAAAACACAACCTCACTGTTGTTGGTGCTGATGGTATGTTAACCAAGCCATTGGCAAGGGAATACATTTGCATATCACCGGGAcaaacaatggatgtgttattgcatgccaaccaagaacctaatcattacTATCTTGCTGCAAGAGCATATTCAAGTGGTGTTGGTGTTGCCTTTGATAACACCACAACCACTGCTAGAGTAAAGTACAGTGGAAACTACACTCCACGTTCATCTCCTTCATTGCCTAACCTTCCCAACTTTAACGACACGCGTGCTGCGTTGGACTTCATTACAAGCTTGAGAGGCTTATCTGAGAGATACCCTCGCCAGGTCCCAACAAACATCACAACTCAAATAGTGACCACTATTTCAGTTAACACTTTGCCATGCCCTAATAATGGCAGAACCTGCCAGGGACCAAATGGAACCATTTTCGCTGCTAGCATGAACAACATAAGTTTTGACACCCCCAACGTTGACATACTAAAAGCCTATTACTACCATATCAACGGGGTTTACAAACCGGGATTTCCAAGATTTCCACCCTTTATATTTAACTTCACTGGGGATTTTTTGCCTGTAACATTGAATATACCAAAGCAAGGGACTAGGGTTAATGTGTTGAATTATGGTGCAACGGTTGAAATTGTTTTCCAAGGGACAAACGTTGTTGCAGGGATAGACCATCCTATGCATCTCCATGGGTTCAGTTTCCATGTTGTAGGATATGGTTTAGGCAATTTTAACCAAAGCAAGGACCCCTTGAATTTCAATCTTGTTGATCCTCCTTATTTGAACACAGTGATTGTCCCTGTAAATGGTTGGGCTGCTATTAGGTTTGTGGCTACCAACCCTGGGGTTTTTGATGTACGCTTTTGTTTTTGCATTAGTGACTTGTTTATGTTGGTGCTCATTTGTGTGGTCTGCGTCACTTTTTTCTTTGTCTCTTTATGGGAGCTTATGTAA 1677 0.3298 MSFGKKLFLQILWWFSLIGLSSQRRSHYSFVVREANYTRLGSTKSILTVNGNFPGPTIKVHRGETIFVNVYNKGNYNITLHWHGVKQPRNPWTDGPAYITQCPIQPGRRFRQKLIFSTEEGTIWWHAHSDWSRATIHGAIFVYPTKNTPYPFPKPHAEIPIIFGEWWKSDINEVFTQFIESGGGPNISDALTINGQPGDLYPCSMAETFEFHVEQGRTYLLRVVNAAMNLILFFSVSKHNLTVVGADGMLTKPLAREYICISPGQTMDVLLHANQEPNHYYLAARAYSSGVGVAFDNTTTTARVKYSGNYTPRSSPSLPNLPNFNDTRAALDFITSLRGLSERYPRQVPTNITTQIVTTISVNTLPCPNNGRTCQGPNGTIFAASMNNISFDTPNVDILKAYYYHINGVYKPGFPRFPPFIFNFTGDFLPVTLNIPKQGTRVNVLNYGATVEIVFQGTNVVAGIDHPMHLHGFSFHVVGYGLGNFNQSKDPLNFNLVDPPYLNTVIVPVNGWAAIRFVATNPGVFDVRFCFCISDLFMLVLICVVCVTFFFVSLWELM 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01619 558 CDD CuRO_1_LCC_plant 28 144 IPR034288 GO:0005507
Gma20g01619 558 Pfam Multicopper oxidase 434 525 IPR011706 GO:0005507|GO:0016491
Gma20g01619 558 SUPERFAMILY Cupredoxins 346 525 IPR008972 -
Gma20g01619 558 Pfam Multicopper oxidase 32 146 IPR011707 GO:0005507
Gma20g01619 558 TIGRFAM laccase: laccase 26 526 IPR017761 GO:0046274|GO:0048046|GO:0052716
Gma20g01619 558 Gene3D - 19 144 IPR008972 -
Gma20g01619 558 Gene3D - 371 528 IPR008972 -
Gma20g01619 558 PANTHER MULTI-COPPER OXIDASE 31 527 IPR045087 -
Gma20g01619 558 Gene3D - 155 342 IPR008972 -
Gma20g01619 558 Pfam Multicopper oxidase 159 309 IPR001117 -
Gma20g01619 558 PANTHER LACCASE-15 31 527 - -
Gma20g01619 558 CDD CuRO_2_LCC_plant 159 306 IPR034285 -
Gma20g01619 558 SUPERFAMILY Cupredoxins 22 168 IPR008972 -
Gma20g01619 558 SUPERFAMILY Cupredoxins 152 333 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01619 Gma-Chr20 43267501 43271365 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01619 K05909 K19791 gmx:100808617 1097.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01619 20 43267501 43271365 Gma20g01619 20 43267501 43271365 ECH