Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01588 ATGTCTGTGGCATCTTCATTTCCATGCATCAAAGTCCCAGCTTGTTCCTCCTCTCCATCATGCACATCTTCATCAACTTCATCATTTAGATTTTCTTCTTCCAAGCCTCATGCTGCTGTTTCTATAAGGAACTCCCAGACTGAAGGGCCTCTGAGAAGACCAGTGGCTCCTTCAGTGAGAGAACCATCAAGTAGTGTCCCTCAGCCACTGAAGCCTTCAGCTCCTTCTCAGGTTCCACCCCTGAAGGCTTCTCCTGTTGCTGGGGATGATAAGAATGTCATTACATTAGAGTTTCAGAGGCAGAAGGCTAAGGAGCTGCAGGAGTACTTCAAACAGAAGAAGCTGGAAGATGCAAATCAGGGTCCTTTCTTTGGCTTCATTGGCAAAAATGAGATTAGCAACGGAAGGCTAGCAGATTTCAAGAAATGGTACTTCCAAATTCGTTACAATCATGATTATCTTAGTTCTGTAGTTATGATGGAGGAGAAGGAAAAGCAAGATGGTAATAAGAACAACTCACTTTTGTGGTGGTTGCAAACAATTTTGGAGTTCTAG 555 0.436 MSVASSFPCIKVPACSSSPSCTSSSTSSFRFSSSKPHAAVSIRNSQTEGPLRRPVAPSVREPSSSVPQPLKPSAPSQVPPLKASPVAGDDKNVITLEFQRQKAKELQEYFKQKKLEDANQGPFFGFIGKNEISNGRLADFKKWYFQIRYNHDYLSSVVMMEEKEKQDGNKNNSLLWWLQTILEF 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01588 184 PANTHER LIGHT-HARVESTING COMPLEX-LIKE PROTEIN OHP2, CHLOROPLASTIC 1 136 - -
Gma20g01588 184 Coils Coil 96 116 - -
Gma20g01588 184 MobiDBLite consensus disorder prediction 11 48 - -
Gma20g01588 184 PANTHER LIGHT-HARVESTING COMPLEX-LIKE PROTEIN OHP2, CHLOROPLASTIC 1 136 - -
Gma20g01588 184 MobiDBLite consensus disorder prediction 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01588 Gma-Chr20 42969135 42970257 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01588 - - gmx:100776918 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01588 20 42969135 42970257 Gma20g01588 20 42969135 42970257 ECH
Gma10g02126 10 48763309 48765798 Gma20g01588 20 42969135 42970257 GST
Gma16g01469 16 33919215 33920915 Gma20g01588 20 42969135 42970257 PCT
Gma02g00716 02 6897552 6899263 Gma20g01588 20 42969135 42970257 PCT
Gma20g01588 20 42969135 42970257 Gma16g01469 16 33919215 33920915 PCT
Gma20g01588 20 42969135 42970257 Gma02g00716 02 6897552 6899263 PCT