Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01573 aTGATGGGTAGTAATGAGATTGAACATTTGTCTGAAGATGTGTTAGATAGGGGTTTTGAATTTGATAGTCAGCAGAAGAAAGATCTCAAGCAAATGGAGATAGAGTCTCAGGGTGAGAAGTTTTATGGAGCTTCTTCTGAGGAGGACGAGGATGTGAACAAGTCATTGCCGCAAGTTGCTTCTTCATCAAGAAGAGGTTTGGAACATTGCATCACGGCCCCTGTTGGAACTGAGAGGAACCCACTTATAGTTGATGATGACATTTTTCTTTCTAGATCAACAACAGGAAAGTGGGAATTCCCTAGGCAGGACACAATATTGGACAGGCTGTCTGAGAAGGTGAAGCAACTGATTACTAACCTAGTGAAGATACAAAATGATGGCACTGTTGAAGTTGATATAGAAATGAGTGCATCTGTTGCTCCAGAATTGTTAGAGCTCCAATCTTTTGCCAAGTCAACAATGAGAGAAAGTCTTAGTTCAGAGTCAAAAAAATCTGTTCCACGGTTACAAATTGTCATACTTGTGGTTGGAACTAGAGGCGACCAGTCAATTTTGTTGAATTCATACTTTCTTGCTTCCATAGAAGAACTAAATATTTACTTGCAGGAGTATGGTCATCATGTTAGGCTGGCAACTCATGATAATTTTAAAACATTTGTGAAGTCAGCTAATGTAGATTTCTATCCTCTGGGTGGTGATCCTCGTATTTTGGCTGGATACATGGCAAGGAATAAAGGTTTAATCCCTTCTGGACCGGCTGAAATATCTGTCCAAAGAAAGCAGCTGAAGGCCATCATTGATTCCCTTCCTCCAGCATGCACAGCACCTGATATGGAAACTGGTGTTCCTTTCAGAGCTCAAGCTATTATCGCCAATCCTCCTGCTTATGGACATGTACATGTTGCTGAGGCCCTTGCGGTGCCCCTCCATATCTTCTTCACAATGCCATGGACGCCAACATATGAGTTCCCCCACCCTTTGGCACGTGTTCCTCAAAGTGCCGGTTATTGGCTATCCTATATAATTGTGGATCTACTAATATGGTGGGGAATGCGAAGAATTATCAATAACTTCAGGAAAGCAACTCTGAAGCTTGCTCCTATTGCATACTTCAGTATGTACCGTGGATCAATATCTCATTTACCGACTAGCTATATGTGGAGTCCTCATGTTGTTCCAAAACCTAGTGACTGGGGCCCATTAGTTGATGTTGTTGGTTATTGTTTCTTGAGCCTTGCTTCAAAGTATCAACCTCGGGAAGATTTTGTCCAATGGATTAAAAAAGGACCACCTCCTTTATATTTTGGGTTTGGGAGCATGCCTCTTGAAGATCCTAAAGGAACAACAGATGTTATATTGGAGGCACTAAAAGATACAGAACAACGGGGAATTATTGACCGGGGTTGGGGCAATCTAGGGAATTTGGCAGAACTTTCTGATAATGTTTTCCTTCTGGAGGAATGCCCTCACGATTGGCTGTTTCCTCAATGTTCTGCTGTGGTGCATCATGGTGGAGCTGGAACCACGGCTACAGGATTAAAAGCTGGGTGTCCGACAACCATAGTTCCATTCTTTGGTGATCAGTTCTTTTGGGGAGATAGAATATATGAGAAAGAATTGGGACCAGCCCCAATCCCAATATCTCAGCTCAATGTAGAGAATTTATCAAATGCCATAAGATTCATGCTCCAGCCAGAGGTGAAATCTCGAGCAATGGAAATTGCTAAGTTGATTGAGAATGAAGATGGTGTTGCCGCTGCGGTTGATGCATTCCATCGCCATCTGCCTGATGAACTGCCACTCCCAACTCCAACTCCTACTCCAGTGGAGGAGGAGGACCACTTGAATCCTTTGCAGTGGTTTTTCCTCCGACTTGGAAGGTTCTGTTGTGCACCTTGTGGTGGTGTGAACACACCTCCTCTTCCAGATACGGGGCAATGGTTGCTCTTGGCGTTAAATGAGAAACTTCCTACTCCAATTGTTGAGATACTAAGAGCTCGAATCATTGGACTGCACCATTTCTTGATGTTGTTTATGATGCTGGCTTTCTCTGTGCTATTTGATTCTGTTAAAGCTCCGGGCCTCGGATTAGGTGCTAGGTACATGTTTACCATGGCAGTTGGCCGCCTTCTTCGTGCCATAACTTTTGCATCTACAATTCTGCCATCTGCCCGTCCTTGGTGTGCTGGTTCCCGGTTCAGAGTTCCGGGATATCCTCATCGTTGGGCTCAGAAATATTATGTTCCCTATGCTACAGATCATGATGCTATCAGCCGGGTGATAAAGCTCGATACAGCTTACGTTGACATTGGAAAACCAGTTGGTGACTACCAGCCAGATTGGGGTTCGATGAGCTTTCTAATTGATTTTCTGCGACCCACTGTCTCCGAAGGACCTTCATGGTACAGTCTGTTAAAGAAAGCTGGAGGTGGCTGCAATGACCTCCTATACAGTGGCCACATGCTTGTTGCCGTGCTCACAGCCATGGCTTGGACGGAAGCATATGGAGGATTCAGTTCTGCTCTTGTATGGCTTCTTGTGATGCACAGTGCCCAAAGAGAAATACGAGAACGCCATCATTACACTGTAGACTGCGTTGTAGCCATCTATGTGGGGATCCTCTTATGGAAGATGACAGGTTTTATCTGGTCACATGAAGCTACATCTAGTAATAGGAGGCTGACTAAATTTGAGAAGATTCAAAGCAGACTAATCCAAGCTTCCAAAGACTCGGACATTGATGAAGTGAGGGAGCTTCTCAAAGAGATTGAGTTAAGCAATGAAGAGAGCAAGAATCAGACTGGAATTAAATATTCACGGTTGTTTCGTAGTGCCACCATTGTCTTTGCACTTGTCATTGTTGTTCTGGCTTTCACACTGACAAGTGATGGATGA 2898 0.44 MMGSNEIEHLSEDVLDRGFEFDSQQKKDLKQMEIESQGEKFYGASSEEDEDVNKSLPQVASSSRRGLEHCITAPVGTERNPLIVDDDIFLSRSTTGKWEFPRQDTILDRLSEKVKQLITNLVKIQNDGTVEVDIEMSASVAPELLELQSFAKSTMRESLSSESKKSVPRLQIVILVVGTRGDQSILLNSYFLASIEELNIYLQEYGHHVRLATHDNFKTFVKSANVDFYPLGGDPRILAGYMARNKGLIPSGPAEISVQRKQLKAIIDSLPPACTAPDMETGVPFRAQAIIANPPAYGHVHVAEALAVPLHIFFTMPWTPTYEFPHPLARVPQSAGYWLSYIIVDLLIWWGMRRIINNFRKATLKLAPIAYFSMYRGSISHLPTSYMWSPHVVPKPSDWGPLVDVVGYCFLSLASKYQPREDFVQWIKKGPPPLYFGFGSMPLEDPKGTTDVILEALKDTEQRGIIDRGWGNLGNLAELSDNVFLLEECPHDWLFPQCSAVVHHGGAGTTATGLKAGCPTTIVPFFGDQFFWGDRIYEKELGPAPIPISQLNVENLSNAIRFMLQPEVKSRAMEIAKLIENEDGVAAAVDAFHRHLPDELPLPTPTPTPVEEEDHLNPLQWFFLRLGRFCCAPCGGVNTPPLPDTGQWLLLALNEKLPTPIVEILRARIIGLHHFLMLFMMLAFSVLFDSVKAPGLGLGARYMFTMAVGRLLRAITFASTILPSARPWCAGSRFRVPGYPHRWAQKYYVPYATDHDAISRVIKLDTAYVDIGKPVGDYQPDWGSMSFLIDFLRPTVSEGPSWYSLLKKAGGGCNDLLYSGHMLVAVLTAMAWTEAYGGFSSALVWLLVMHSAQREIRERHHYTVDCVVAIYVGILLWKMTGFIWSHEATSSNRRLTKFEKIQSRLIQASKDSDIDEVRELLKEIELSNEESKNQTGIKYSRLFRSATIVFALVIVVLAFTLTSDG 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01573 965 Pfam Glycosyltransferase family 28 N-terminal domain 172 324 IPR004276 GO:0005975|GO:0016758|GO:0030259
Gma20g01573 965 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE UGT80B1 6 635 - -
Gma20g01573 965 Gene3D Glycogen Phosphorylase B; 172 584 - -
Gma20g01573 965 Coils Coil 914 934 - -
Gma20g01573 965 Gene3D Glycogen Phosphorylase B; 410 579 - -
Gma20g01573 965 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 198 596 - -
Gma20g01573 965 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 6 635 - -
Gma20g01573 965 MobiDBLite consensus disorder prediction 26 60 - -
Gma20g01573 965 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 435 578 IPR002213 GO:0008194
Gma20g01573 965 Pfam PAP2 superfamily C-terminal 812 879 IPR025749 -
Gma20g01573 965 CDD GT1_Gtf-like 202 595 IPR002213 GO:0008194
Gma20g01573 965 Coils Coil 107 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01573 Gma-Chr20 42816204 42830244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01573 202 637 Glycosyltransferase AT1G43620 78.947 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01573 K05841 - gmx:100800091 1220.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01573 20 42816204 42830244 Gma20g01573 20 42816204 42830244 ECH
Gma02g00729 02 7038785 7050034 Gma20g01573 20 42816204 42830244 PCT
Gma20g01573 20 42816204 42830244 Gma02g00729 02 7038785 7050034 PCT