Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01568 ATGCCTGCGACGGACTACCAAGGTTCGTCTTCTCCTTCATCGTTAACCCATTTTGGCCGTTCAATTCTGAGTCTTCGTCAAGAACAGGTTCACTCCATTTCCATGGAAGGGTCAAGCTTGGAGGCTGAGTTGGAATCCTTTCAGCAACACGTCACTGACCGGTTCCTTGAACTCACTTCGGTTGTTCATGATGATTTGCTTTCGCTCTCGTGGGTTGGGAAGCTCCTTCATTGCTTCCTGTGTTGCCAAGAGGAATTCAAGGCCATTCTCCACAGCCACAGGGCTCAGGTGTTGAGACCCCCATTGGATCGCATGGTGTCTGAATACTTTGAGCGCAGTGTGAAGGCTTTAGATGTTTGCAATGCCATTCGTGACGGTATTGAGCAGATTCGCCAATGGCAGAAGCTGTTGGAGATTGTGCTCTATGCATTGGGGCATCAGAGGAGCATTGGTGAGGGCCAATTTCGTAGAGCCAAGAAGGCCCTCATTGATTTGCACATCGGGATGCTTGATGATCAGGACTCCAACGCATCAATTGCACATCGAAACCGGTCCTTTGGCCGCAGCACTGGTAGCAGAGACAGTCATAGTCATGGTAACAATCATAGCAATAATAATACCTATCACCATCGGTCATTGGGGCATTTTCGATCACTTTCGTGGAGTGTTTCTCGGACTTGGTCTGCTGCTAGGCAGCTCCAAGCAATTGGGAACAACATTTATCCACCTAAGGCAAATGAGCTTATGGCTTCTGGTGGCCTTGCAATGCCTGTGTTCATCATGAATTCGATCCTGTTGTTTGTGATGTTGGCACTTGTGGCTGCAATTCCGTGCCAGGACCGTGGATTACATGTCCATTTTACCATTCCCAGGAATTACTCCTGGGCTGCTGCAATCCTCTCACTTCACGAAAGGATCGTGGAGGAGTCGAAGAAACGGGAGCGGAAGAATTCTTGTGGCTTGCTTAAGGAGATTCATCAGATTGAGAAATGTGCTAGAGTGATGAATGATTTGGCTGATTCTGTCCACTTCCCATTGACGGAGGGGAAAGAACGAGAGGTTAGACAGATAGTGCAGGAGGTTTCACAAGTCTGTGATGCTTTGAAAGGTGGACTAGACCCTTTGGAGCGCCAAGTGAGGGATGTCTTCCATAGAATTGTGCGCAGCCGAACAGAAGGGCTTGACTCACTTGGCAGGCCAAGCAATGCTGAGTAA 1215 0.4872 MPATDYQGSSSPSSLTHFGRSILSLRQEQVHSISMEGSSLEAELESFQQHVTDRFLELTSVVHDDLLSLSWVGKLLHCFLCCQEEFKAILHSHRAQVLRPPLDRMVSEYFERSVKALDVCNAIRDGIEQIRQWQKLLEIVLYALGHQRSIGEGQFRRAKKALIDLHIGMLDDQDSNASIAHRNRSFGRSTGSRDSHSHGNNHSNNNTYHHRSLGHFRSLSWSVSRTWSAARQLQAIGNNIYPPKANELMASGGLAMPVFIMNSILLFVMLALVAAIPCQDRGLHVHFTIPRNYSWAAAILSLHERIVEESKKRERKNSCGLLKEIHQIEKCARVMNDLADSVHFPLTEGKEREVRQIVQEVSQVCDALKGGLDPLERQVRDVFHRIVRSRTEGLDSLGRPSNAE 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01568 404 Pfam Protein ROH1-like 16 397 IPR008511 -
Gma20g01568 404 MobiDBLite consensus disorder prediction 184 208 - -
Gma20g01568 404 PANTHER OS04G0688000 PROTEIN 1 402 - -
Gma20g01568 404 PANTHER BPS1-LIKE PROTEIN 1 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01568 Gma-Chr20 42781204 42783414 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01568 - - gmx:100818059 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01568 20 42781204 42783414 Gma20g01568 20 42781204 42783414 ECH
Gma10g02146 10 48934653 48936628 Gma20g01568 20 42781204 42783414 GST
Gma16g01490 16 34235647 34237693 Gma20g01568 20 42781204 42783414 PCT
Gma02g00732 02 7078205 7080790 Gma20g01568 20 42781204 42783414 PCT
Gma20g01568 20 42781204 42783414 Gma16g01490 16 34235647 34237693 PCT
Gma20g01568 20 42781204 42783414 Gma02g00732 02 7078205 7080790 PCT