Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01563 ATGGATCACAGTGCGGATGCTCAACGCACGGACCTGATGACCATCACCCGTTTCGTGCTGAACGAACAGTCGAAGCACCCAGAGTCTCGTGGCGATTTCTCAATCCTGCTCAGTCACATTGTTCTCGGCTGCAAGTTCGTCTGCTCTGCTGTTAACAAGGCGGGTCTTGCTAAGCTTATTGGACTTGCAGGAGAGACAAATGTTCAGGGTGAAGAGCAAAAGAAATTGGATGTCCTATCCAATGATGTCTTCATCAAGGCATTGATCAGCAGTGGACGAACATGCATCTTGGTGTCTGAAGAAGATGAGGAAGCAACATTTGTGGAACCTTCTAAGCGTGGAAAATACTGTGTTGTTTTTGACCCGCTGGATGGTTCCTCTAACATTGATTGTGGTGTTTCAATTGGCACAATCTTTGGGATTTATTTGATAAAAGAAGACCATGAACCAACCGTAGAAGATGTTTTGCAACCTGGGAAGAACATGTTGGCAGCTGGTTATTGCATGTATGGAAGCTCTTGCACGCTTGTGTTAAGCACTGGAAGTGGTGTTAATGGTTTCACCCTTGATCCATCTCTTGGGGAGTTCATTCTAACTCACCCTGACATCAAGATCCCAAAGAAAGGCAAGATCTATTCAGTGAATGAAGGAAATGCTAAAAACTGGGATGGCCCTACTACCATGTATGTGGAAAACTGCAAGTATCCAAAAGATGGTTCATCACCAAAGTCCCTAAGATATATTGGAAGCATGGTTGCTGATGTTCACCGCACATTGCTTTATGGAGGTATCTTTCTGTACCCGGCTGATAAAAAGAGTCCAAATGGGAAACTTCGTGTACTCTATGAAGTCTTCCCAATGTCATTCTTGATGGAACAAGCAGGAGGACAGGCTTTCACCGGCAACCAAAGGGCACTTGATTTGGTTCCAAAGAAGTTGCACGAGCGATCTCCCATATTCCTTGGTAGCTATGAAGATGTAGAGGAAATCAAGGCTCTTTACTCTGCTGATGAAAAATAG 1020 0.4451 MDHSADAQRTDLMTITRFVLNEQSKHPESRGDFSILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQGEEQKKLDVLSNDVFIKALISSGRTCILVSEEDEEATFVEPSKRGKYCVVFDPLDGSSNIDCGVSIGTIFGIYLIKEDHEPTVEDVLQPGKNMLAAGYCMYGSSCTLVLSTGSGVNGFTLDPSLGEFILTHPDIKIPKKGKIYSVNEGNAKNWDGPTTMYVENCKYPKDGSSPKSLRYIGSMVADVHRTLLYGGIFLYPADKKSPNGKLRVLYEVFPMSFLMEQAGGQAFTGNQRALDLVPKKLHERSPIFLGSYEDVEEIKALYSADEK 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01563 339 SUPERFAMILY Carbohydrate phosphatase 8 334 - -
Gma20g01563 339 Gene3D - 4 203 - -
Gma20g01563 339 PRINTS Fructose-1,6-bisphosphatase signature 38 65 IPR028343 GO:0042132
Gma20g01563 339 PRINTS Fructose-1,6-bisphosphatase signature 75 101 IPR028343 GO:0042132
Gma20g01563 339 PRINTS Fructose-1,6-bisphosphatase signature 155 178 IPR028343 GO:0042132
Gma20g01563 339 PRINTS Fructose-1,6-bisphosphatase signature 186 209 IPR028343 GO:0042132
Gma20g01563 339 PRINTS Fructose-1,6-bisphosphatase signature 212 239 IPR028343 GO:0042132
Gma20g01563 339 PRINTS Fructose-1,6-bisphosphatase signature 310 335 IPR028343 GO:0042132
Gma20g01563 339 PIRSF FBPtase 9 339 IPR028343 GO:0042132
Gma20g01563 339 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE, CYTOSOLIC-LIKE 2 339 - -
Gma20g01563 339 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 13 336 IPR000146 GO:0005975|GO:0016791
Gma20g01563 339 ProSitePatterns Fructose-1-6-bisphosphatase active site. 276 288 IPR020548 GO:0005975|GO:0042578
Gma20g01563 339 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 205 334 IPR044015 -
Gma20g01563 339 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 2 339 IPR000146 GO:0005975|GO:0016791
Gma20g01563 339 PIRSF FBPtase_SBPase 9 339 IPR000146 GO:0005975|GO:0016791
Gma20g01563 339 CDD FBPase 20 334 IPR000146 GO:0005975|GO:0016791
Gma20g01563 339 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 13 201 IPR033391 -
Gma20g01563 339 Gene3D - 204 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01563 Gma-Chr20 42671125 42675918 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01563 K03841 - gmx:100815943 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01563 20 42671125 42675918 Gma20g01563 20 42671125 42675918 ECH
Gma10g02151 10 49030167 49034350 Gma20g01563 20 42671125 42675918 GST
Gma16g01499 16 34407382 34412657 Gma20g01563 20 42671125 42675918 PCT
Gma20g01563 20 42671125 42675918 Gma16g01499 16 34407382 34412657 PCT