Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01562 ATGGGGGATCGAGGTGAAGACGAGGATTTGCAAATGGCGATTCGGATGAGCATGCAGCGCGGGACGCCGGAGCCGAAGCGCAGCAAGCCGCGTGACGCCGTCGCCGATGCGGTTTCGGGGTCGCCGGAGGAGTTGCCGGAGTACAAGACCCGGCGAAGGGAGCTCATGGCGGCGGCGGCCGAGAAGCGGATGGCGGCAGCGGCGAGGGTTTCGCCTTCTCCTTCGCCGTCGCCGTCGCCGGTGAAAAAAGGCGGTGAATCAGGGAGGAGAGAGGAGGATTCGTGTTTGAAGAGTGTGAATTTGAGTAAGGAGCTTTCTGTGGAAGAAGCTAATCAATTGTTTGGTATGGTGTTTGGGAATGAAGTTTCCAAGGGCATTCTCGCACAGTGGAGCAACCAGGGAATTCGGTTTAGCTCTGATCCTGTAACATCAATGGGCCTAGTGCAGCATGAAGGCGGTCCCTGTGGCGTATTGGCAGCTATTCAAGCATTTGTGCTTAAATACATTATTTTCTTCAGTGATGAGTTGAAAGATGTGTCATGCATGTCACAGAAGGGTCCGGGTGCAGCATTTAAAAGTCAGTCTGTTCCATCAAATAATTTTTCTTCGCTCACTGAAGGTGAAAAAGTAAGAGCTCTTGTAAAAAGTATGGGTGAAATTTTATTTTCATGTGGAAGTAATAGAAGGGCTGTCATTGCAACTTTGAGCATTTCCGAGAATGACATTCAGCGTTTTGAAGGGATTTCAAAGGATGAGGTTGTTTCAAAATCACTTCAAGGTCTTTCCATTGAATCTGCCTTGGATCTGCAGAAAGTTCTTAGAGTTGAAACATGCACATCACAAACAAATGCATTGCAAAGGCTTGAAGCAAATCTTCCCCTATTCCAAAGTCGAATGGGAGCATTGCTTTTCCTAATCTCTGCTTTACTTTCTCGGGGACTGgacttggttcaaagtgacagggatgatcccagcctaccactggttactgcaccttttgggcatgcctcccaggaaattgtgaacctactgctctgtggggaggctgttcctaatgtgtttgatggaaggatggatttaggaggaggaatgtttgtgaaaggtatatccggatatgtggaagttggatttctgactctattagaatccctgaatttttgcaaggttggtcagtttctgaaatccccaaagtggcctatatgggttgtggggagtgaatcccattacacggtgctgtttgctcttgaccccagcgttcaaaatgagaatgaactggaaggaaaggaaactctgattcgcagagcttttgatgcacaagatcagagtggaggtggtggtttcattagtgtggaaggattccatcaagtcctcagagaaacaaatatcaaatttccaccagagaagctggaacatctttgctcttcagggttcattgtatggagtgaattctggcaagtaattttggatctagacaaaagcttgggaggtttgaaggattcatccggtttgatgggtaagaaggtttttgatctataccattttaatgggattgccaaatcagacctgaacggcagtcaagtaaattcccggggtgaaactccactgcaaagacCCCGGCTCACAAAATTGAGAGTTTCAGTCCCCCCAAGATGGACGCCTGAGGAATTTATGGCAGATGTGAAAGTTTCATCTGCTGCTAGTGCAAGTGAGTCTACTGGGAAGGACGACGAAGTATCTAAACCAGAGCCTTCTCAGCATGCACCTTTGGTGGACTGCATAAGGACACGCTGGGCACGTGCTGTCTGCACCTGGTCAGGGGATCCTCCTAGTATAGTTTGA 1839 0.3116 MGDRGEDEDLQMAIRMSMQRGTPEPKRSKPRDAVADAVSGSPEELPEYKTRRRELMAAAAEKRMAAAARVSPSPSPSPSPVKKGGESGRREEDSCLKSVNLSKELSVEEANQLFGMVFGNEVSKGILAQWSNQGIRFSSDPVTSMGLVQHEGGPCGVLAAIQAFVLKYIIFFSDELKDVSCMSQKGPGAAFKSQSVPSNNFSSLTEGEKVRALVKSMGEILFSCGSNRRAVIATLSISENDIQRFEGISKDEVVSKSLQGLSIESALDLQKVLRVETCTSQTNALQRLEANLPLFQSRMGALLFLISALLSRGLDLVQSDRDDPSLPLVTAPFGHASQEIVNLLLCGEAVPNVFDGRMDLGGGMFVKGISGYVEVGFLTLLESLNFCKVGQFLKSPKWPIWVVGSESHYTVLFALDPSVQNENELEGKETLIRRAFDAQDQSGGGGFISVEGFHQVLRETNIKFPPEKLEHLCSSGFIVWSEFWQVILDLDKSLGGLKDSSGLMGKKVFDLYHFNGIAKSDLNGSQVNSRGETPLQRPRLTKLRVSVPPRWTPEEFMADVKVSSAASASESTGKDDEVSKPEPSQHAPLVDCIRTRWARAVCTWSGDPPSIV 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01562 612 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 5 19 IPR003903 -
Gma20g01562 612 PANTHER UNCHARACTERIZED 4 611 IPR039785 GO:0004843|GO:0071108|GO:1990380
Gma20g01562 612 SUPERFAMILY EF-hand 429 488 IPR011992 -
Gma20g01562 612 MobiDBLite consensus disorder prediction 1 95 - -
Gma20g01562 612 MobiDBLite consensus disorder prediction 45 59 - -
Gma20g01562 612 MobiDBLite consensus disorder prediction 567 586 - -
Gma20g01562 612 Pfam Deubiquitinating enzyme MINDY-3/4, conserved domain 116 426 IPR025257 -
Gma20g01562 612 SMART DUF4205_3 114 482 IPR025257 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01562 Gma-Chr20 42654600 42665924 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01562 K22647 - gmx:100815405 1162.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01562 20 42654600 42665924 Gma20g01562 20 42654600 42665924 ECH
Gma10g02152 10 49037484 49048056 Gma20g01562 20 42654600 42665924 GST