Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01541 ATGGACACTGAAGGCTTATCCGTAATCTGCGCCGGCATCGGAACCATCGAAGTCGACGATGAAGGCAACGTAATCGGTTACATCAAAGGCCAATACTGTCTCGATAACCTGAAAGACCTTCTGCGCTTTCTTAGGCGCGACGATCCCCAAACGCGCGATGTCTTCAAGCAAGTCTGCAAATGGAACATCGTTTCCAAGTACTTAATCCCTACCATCGAGCTCTATCATGAAGATAGCAACTTGCTACTCAATGCAGTGAAGGTTCTGGTGTTCCTTACGATGCCGATCGAGCCTTCTTCCACGGATATATCCCAGCAGCTGGAGTATCTTTGGGGTTTGAAGTCTGCTTTGACTAACAGTGACGTTGCTGCAGTGATAGTGTCGTTTCTAGAGAGACCGCTCGAGAATTTGGAACGTGGCACGTTTAGTGAGGATGATTGGAAATTGGTACAGCTAGTGCTTACGTTATTTAGAAATATCCTAGCTGTTCAAGAGATTCCGACTCACCAGAAGTCAGGGGGACTTGCTACTCAGTTGTTATCAATGAGAGACCGGTTTCTGGAACTTTTGTTTCGGGAGAATGTAATGGATATAATGCTGGTTATATCTCAATGTGTTGGTAGTTCTAATGTTTATCTCCGTCAGGATAACTTGCTTCTACTGGAAATTTTTCATTACATTTTGATGGGTCAGGACCCGGAGTTAATTGTTAGGGCACATTTGAAGGAATCAAAGGAGGACGAACAACCCCAGACTTCTCTTAATAGTCTCCAGTTCATTTTGGAGGAGGAAAAGAAGAGAAGAAATATTTGTAAGCTCAACAATCTGAGTCGACATTCACAATTTAGTGGAACATTTGCTAGGCTTACCATGGATGGTTCTAAGGCAGTAATTAAGGGAAATCCTAATTCTTCTCACAATGTGCTGCTTAAAGCACAAAATGTCACCCGGGGTCCTACCAAAAGAACTGTGTGGGATCATCCAAGGTTGCCTTCAACAGAGGATAAGATATTGGAGCTGCTTCACGGATTTGTGAATCAGTTTCTTTCTGGGGGATACAATGTTTTGATGCGATCCATTCGTGAAGATATTGAAAAGGAACATCCCTCAATTCAAAAAAGTGATGTTGTTGTTTTCTTTCAAGTGGCTGAATTTGTCACTTCATTTCAGTGTTACAAGTATTCAGCTTCTAAGACCACGGAGGGAGGGGACACATTTGAGACTTTTAGTCATAAAGATGCAGATACCTCAGATTTCAGTGGTCAAATATGTGGTCCAATTGCAGCATCCTTGAATGAGTCAATGTTTCAATTGGTTATTTCAAAGTGGCGGCATGCCTATGATGGTCTAAAGGAAACAAATGACTATCAGTTTCTATCTGCAGCCGGTTCTCTTTTGAAAAACATGATTCGCATGCTGGATTTGATTCTTAAATTGTTGCCTGAAGACTCAAAGGAACCTCAAACAGCTCGCATACTTTTGTACAAGTTATTTTATGATCAGACTGAGGAAGGGATGACTCAGTTCCTATTGAATTTGATTAAAACCTTTGACACCCACAAACAACCCAAAAGTGATCTTTCAGATTTAGTGGAAATCATTCACAAGGTTGTAAAGCTGATGGATAATCTTCAGTCTCGAGGAGCATTGAGGGTGTCTAGAAAATCAAGGAAAGTGAAAAAAAAAATAATTCCAGAAGGGACAGAATCAGGGGACAAACTGGCTGGAGATCATTCTTTCATTCAAAATGAAACTGGCATCTCAACTGTCAATCAATCAGCAGAAAATCAGCCACTGCAGGAAGGCCTACCAAATGCAAATTCCACTGGGGAAGATGTTATCCCTGATGATAATGAACATGAAAATCATGTTGAGGAAGTTGGGAACTCCCAAGTTGGGTTAGAACCAATGGGAGCCACAAATTCTGAACATGTTAATGAGGATATGTTGGATGGTACTAAGGATTTTTCTGAAGATGAGCAACTACATGCATATAATGAAGTTGATTTCAAGGTTTCAACGCTGGTCTCTGCCTTTGCAAATCATAATATCATTCAGAAATTATGTTGGTTGCTCAAGTTTTACAAGAGCAATTCCCTGGCTACAAACCATTACATAATAAGCATGCTGCGGAGAATAAGTGATGACCTTGAACTCCATCCTATGCTTTACCAGTTGTCGCTGCTCACAACTTTTTATGACATCCTGGTTGAACAAAAGTCATGTCCCTGCAAGGACTATGCAGGTATAGTTGATTTTCTGACTTGTTTGGTCAGAAAGATGCTAAAGAAAATGAAAAAGCAACCCCTCTTGTTTGTGGAACTCCTTTTCTGGAAGACTCGGAGGGAATGCCATTACATCAATGCTGAATATTTGTTGAGCGAGCTTGGTCATTTGAAGAAAGAAAGTGCCAATTGGAATAACACTCAGGGAGATGAAGAAATTGGTTCATCCCCAGCAAAGGTGTGGACACGCAGAAGCATAGCTGATGCACTTGGTGAGGATGAAGCCGATGTTGTGATTACTCATGACTCAGGATATCAAAAAGACAAGCTTGATGATGTTATTAAAGGCTTTGCACCTACCTCTGGCAGTAACAGTGACAAAGATGATCATAATGGGGAGCAATTGATGGAAGATGAATCTCAAATTGCTCCAAGGAGAAGGAAGAAACTTGTTCTTGATGGTGATTTGGAAAGACAAATCAAAGATCTCCATGAGAAATTCAAAGATGACCAACATTGCAGTCACCGTATAGCTGAAGTGCTAGATCCAGATGGTAAAATTTCACCAGCTCAAATTTCCAATATGTTAAAAAGGTTAGGACTAGCAGTTGCACCTAGGAGAAAGATGTGTGATGCTGATGCTGAAGGACCTTTGTCTACTAGCCCTAATCAGTTAGACAGTGACAAAATAACAGGAGCTACCAATCATAAATCCGTGAATTTGGAGGGAAGCCTGTTGGTTCAGCACCTGCAAAAAAAAAAGAGAGTCCAGGCTTTCAATAAAGATCAGGAAGCTCTAATCAAAGTTCTATATGAGCAATTCAAGGACCAAAGAAGATGTAGTTACATGATAGCCAATGCACTGGATAAGGATGGTAAATTCACTACTGCCCAAGTCTCTCGAAAACTTAAGCAGCTTGGTTTGTCTCTTCCTCTGAAGAGTTCTGGAGGAAAAATGCACCCAAAGGGTGCAGATCTCATGGATCGTTCAAATGAAAGGATGGATGAATCTGATGATGAGACATTGGTATCACTGGTAAAAAGGAAGAAAATGGAGAGTGACAAATTATCAAGGGGACAGTTACATGGGCAAACCAGTGAGGATAAATTGTCAAAAGACGATTCTGATGATGAAATGCTCAGCTCTGTTCTCAAGAAAAAAATAAATAGCAAAGTATCAACTGAACAATTACTTGAACCCATTAATGTGGATTCATCGTCAAGAGATGATTCTGATGATGAAATGCTCAGCTCTGCTCTCAAAAGAACTAGACGACCATCTCTTAAATCAAAGCAAGTTGAGCTTGAAAATATCCAAATTCATGAGAGAATAATGGGCGACGATTCTTTCAATGGAGGCATAACAGAGGTTTCGGAAGGGGAATATCGTGTTGATTCCATGAATTCCTCTCAAGTAGAATATCAGCAAATGGATGACTTAGCAGATTTAGAGGATGAAGTGGCTGTTAGTGCAGTTCCTGACAATGCCAGATCCAGAAGGAAGCTGAGAATGGTGATTGATCCCGAGGACGATGACTGA 3765 0.4088 MDTEGLSVICAGIGTIEVDDEGNVIGYIKGQYCLDNLKDLLRFLRRDDPQTRDVFKQVCKWNIVSKYLIPTIELYHEDSNLLLNAVKVLVFLTMPIEPSSTDISQQLEYLWGLKSALTNSDVAAVIVSFLERPLENLERGTFSEDDWKLVQLVLTLFRNILAVQEIPTHQKSGGLATQLLSMRDRFLELLFRENVMDIMLVISQCVGSSNVYLRQDNLLLLEIFHYILMGQDPELIVRAHLKESKEDEQPQTSLNSLQFILEEEKKRRNICKLNNLSRHSQFSGTFARLTMDGSKAVIKGNPNSSHNVLLKAQNVTRGPTKRTVWDHPRLPSTEDKILELLHGFVNQFLSGGYNVLMRSIREDIEKEHPSIQKSDVVVFFQVAEFVTSFQCYKYSASKTTEGGDTFETFSHKDADTSDFSGQICGPIAASLNESMFQLVISKWRHAYDGLKETNDYQFLSAAGSLLKNMIRMLDLILKLLPEDSKEPQTARILLYKLFYDQTEEGMTQFLLNLIKTFDTHKQPKSDLSDLVEIIHKVVKLMDNLQSRGALRVSRKSRKVKKKIIPEGTESGDKLAGDHSFIQNETGISTVNQSAENQPLQEGLPNANSTGEDVIPDDNEHENHVEEVGNSQVGLEPMGATNSEHVNEDMLDGTKDFSEDEQLHAYNEVDFKVSTLVSAFANHNIIQKLCWLLKFYKSNSLATNHYIISMLRRISDDLELHPMLYQLSLLTTFYDILVEQKSCPCKDYAGIVDFLTCLVRKMLKKMKKQPLLFVELLFWKTRRECHYINAEYLLSELGHLKKESANWNNTQGDEEIGSSPAKVWTRRSIADALGEDEADVVITHDSGYQKDKLDDVIKGFAPTSGSNSDKDDHNGEQLMEDESQIAPRRRKKLVLDGDLERQIKDLHEKFKDDQHCSHRIAEVLDPDGKISPAQISNMLKRLGLAVAPRRKMCDADAEGPLSTSPNQLDSDKITGATNHKSVNLEGSLLVQHLQKKKRVQAFNKDQEALIKVLYEQFKDQRRCSYMIANALDKDGKFTTAQVSRKLKQLGLSLPLKSSGGKMHPKGADLMDRSNERMDESDDETLVSLVKRKKMESDKLSRGQLHGQTSEDKLSKDDSDDEMLSSVLKKKINSKVSTEQLLEPINVDSSSRDDSDDEMLSSALKRTRRPSLKSKQVELENIQIHERIMGDDSFNGGITEVSEGEYRVDSMNSSQVEYQQMDDLADLEDEVAVSAVPDNARSRRKLRMVIDPEDDD 1254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01541 1254 Pfam Timeless protein 27 287 IPR006906 -
Gma20g01541 1254 MobiDBLite consensus disorder prediction 1141 1170 - -
Gma20g01541 1254 PANTHER PROTEIN TIMELESS HOMOLOG 1 1174 - -
Gma20g01541 1254 MobiDBLite consensus disorder prediction 1052 1118 - -
Gma20g01541 1254 MobiDBLite consensus disorder prediction 1147 1162 - -
Gma20g01541 1254 MobiDBLite consensus disorder prediction 1064 1118 - -
Gma20g01541 1254 PANTHER TIMEOUT/TIMELESS-2 1 1174 IPR044998 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01541 Gma-Chr20 42440572 42449706 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01541 K03155 - gmx:100796385 2400.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01541 20 42440572 42449706 Gma20g01541 20 42440572 42449706 ECH
Gma10g02172 10 49257604 49266621 Gma20g01541 20 42440572 42449706 GST