Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01455 ATGGCCTCCTTAAGCTGCCAGTTTCATTCCACCAGCTTGTTGAATTCTAAGAATGTCAACAGAAGGAGGAAACGTTTCATTTTTTGCTCAGCACAGCCTACACAAAACAATATTAAGGTTGTGATTAATGGAGCAACCAAGGAAATAGGAAGGGCAGCAGTAGTGGCAGTGACTAAGGCCAGAGGAATGGAGGTTGCAGGAGCGGTGGATACTTGTCATGTTGGGGAAGATATTGGAAAGATATGTGGCATGGAAGAGCCCCTTGAAATACCCATAATAAATGACCTTACTATGATTTTGGGCTCTATATCTCAGGGCGTCTTGGTTGCACCAACCCTTTCCATAGGATCAATATTATTGCAACAAGCTGCGATTTCAGCTTCTTTTCATTACAGCAACGTCGAAATCGTGGAATCTAGGGCTAATGCAAATGATCTTCCATCAGCAGATGCAAACCAAATTGCCAACAATCTCTCCAACCTGGGCCAAATCTATAACAGAGAAGACCCTTCAACAGATGTCTTGGCAAGGGGTCAAGTCCTAGGAGATGGAATTCGTGTACACAGCATGGTCCTTCCAGGCATTCCTTCTAGTACAACAGTTCACTTCTCTGGTCCAGGAGAGGTATACTCTATCAAGCATGATATCACAGATGTGAAGTGTCTCATGCCTGGCTTGCTATTAGCCATTAGAAAAGTAGTGCGCCTCAAGAATTTGGTATATGGCTTGGAGAAGTTTATATGA 744 0.4355 MASLSCQFHSTSLLNSKNVNRRRKRFIFCSAQPTQNNIKVVINGATKEIGRAAVVAVTKARGMEVAGAVDTCHVGEDIGKICGMEEPLEIPIINDLTMILGSISQGVLVAPTLSIGSILLQQAAISASFHYSNVEIVESRANANDLPSADANQIANNLSNLGQIYNREDPSTDVLARGQVLGDGIRVHSMVLPGIPSSTTVHFSGPGEVYSIKHDITDVKCLMPGLLLAIRKVVRLKNLVYGLEKFI 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01455 247 PIRSF DHPR 101 247 IPR023940 GO:0008839|GO:0009089
Gma20g01455 247 PIRSF DHPR 36 105 IPR023940 GO:0008839|GO:0009089
Gma20g01455 247 Gene3D - 37 109 - -
Gma20g01455 247 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 36 138 IPR036291 -
Gma20g01455 247 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 114 218 - -
Gma20g01455 247 Pfam Dihydrodipicolinate reductase, N-terminus 38 112 IPR000846 GO:0008839|GO:0009089
Gma20g01455 247 Gene3D Dihydrodipicolinate Reductase; domain 2 114 216 - -
Gma20g01455 247 PANTHER DIHYDRODIPICOLINATE REDUCTASE 1 106 IPR023940 GO:0008839|GO:0009089
Gma20g01455 247 PANTHER DIHYDRODIPICOLINATE REDUCTASE 104 247 IPR023940 GO:0008839|GO:0009089
Gma20g01455 247 PANTHER DIHYDRODIPICOLINATE REDUCTASE-LIKE PROTEIN CRR1, CHLOROPLASTIC 1 106 - -
Gma20g01455 247 PANTHER DIHYDRODIPICOLINATE REDUCTASE-LIKE PROTEIN CRR1, CHLOROPLASTIC 104 247 - -
Gma20g01455 247 Pfam Dihydrodipicolinate reductase, C-terminus 119 246 IPR022663 GO:0008839|GO:0009089
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01455 Gma-Chr20 41690413 41694740 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01455 K16908 - gmx:100782083 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02261 10 50161884 50164458 Gma20g01455 20 41690413 41694740 GST