Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00911 ATGGCCTCCAACGGCGACGCCGTTCATCCCCACCCTTCCAAAAAGATCAAACTCTTCAGCAATTCCATTAACTCAACTAATTCCTCGTTTATCACCCATGCCGAGATCGAATCGGAATTCTCCCACCACCACCCCACGGTGGCGCGCCTCAACAACGGCGCCTTCGGGTGCTGCCCGGCTTCCGTGATCGCCGTGCAGCGCGAGTGGCAGATGAAGAACCTCCGGCAACCGGACCACTTCTACTTCAACGACCTCAAGAAGGGACTCCTTCACTCCCGCACCATCATCAAGAACCTCGTCAACGCCGAACACGTGGACGAGATCTCCCTCGTCGACAACGCCTCCACCGCCACCGCCATCGTCCTCCAGCAAGCCGCCTGGGCCTTCCAGGAAGCAAAATTCCAGAAAGGCGACGTGGTCCTCGTGCTCCACTACGCCTACGGCGCCGTCAAGAAAGCCATCGAGGCCTACGTGGTGCGCGCCGGAGGCACCGTTATCGAAGTCCCCCTCCCCTTCCCCGTCACCTCCAACGACGACGTAGTCAACGAATTCCGAAAAGCCCTTGAGAGGGGCAAGTCCCGAGGCAACAGAATTCGCTTAGCGGTTATCGACCACGTGACTTCCATGCCCAGCGTGGTCATCCCCGTTAAGGACTTGGTTAAAATCTGCAGAGAGGAGGGTGTGGAGCAGGTATTCGTGGACGCGGCACACTCGATTGGGTGCACGCGCGTGGACATGCAGGAGATCGGAGCGGACTTCTACACCAGCAACTTGCACAAGTGGTTCTTCTGCCCTCCCTCCGTGGCGTTCCTCTACGCACGTGCCTCCTCTAAGGCACGTGACCTGCACCATCCCGTGGTGTCGCACGAGTACGGGAAGGGGTTGGCCGTGGAGAGCTCGTGGACCGGGAACAGGGACTACAGCGCGCAGCTGGTGGTTCCGGCGGTTATGGAGTTCGTGAAAAGGTTCGAGGGTGGGATTGAAGGGATCAGAAAGAGGAACCATGATTTGGTTGTTGAGATGGGGGAGATGCTGGTGGAGGCTTGGGGGACCCACCTTGGGAGTCCTTCGCATATGAGTGCTAGCATGGTGATGGTGGGTTTGCCTCCTTCTTTGGGTATTGGGAGTGACTCTGATGCTCAAAAGCTTAGGACCCGTTTGAGGGATGAATTTGATGTTGAAGTACCAATTTATTTTCGTGGTGGGGAAGATGGCTCTGTTACTGCGTATGCACGAATTTCTCGTCAGGTTTACAACAAGGTTGAGGACTATTATAAGTTCAGGAATGCGGTTAATCAACTTGTGCAAGATGGGTTTACTTGTGCTCTTCTTTCGGCTTGA 1341 0.5593 MASNGDAVHPHPSKKIKLFSNSINSTNSSFITHAEIESEFSHHHPTVARLNNGAFGCCPASVIAVQREWQMKNLRQPDHFYFNDLKKGLLHSRTIIKNLVNAEHVDEISLVDNASTATAIVLQQAAWAFQEAKFQKGDVVLVLHYAYGAVKKAIEAYVVRAGGTVIEVPLPFPVTSNDDVVNEFRKALERGKSRGNRIRLAVIDHVTSMPSVVIPVKDLVKICREEGVEQVFVDAAHSIGCTRVDMQEIGADFYTSNLHKWFFCPPSVAFLYARASSKARDLHHPVVSHEYGKGLAVESSWTGNRDYSAQLVVPAVMEFVKRFEGGIEGIRKRNHDLVVEMGEMLVEAWGTHLGSPSHMSASMVMVGLPPSLGIGSDSDAQKLRTRLRDEFDVEVPIYFRGGEDGSVTAYARISRQVYNKVEDYYKFRNAVNQLVQDGFTCALLSA 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00911 446 PANTHER L-CYSTEINE DESULFHYDRASE 1 446 - -
Gma20g00911 446 PANTHER ISOPENICILLIN N EPIMERASE-LIKE PROTEIN 1 446 - -
Gma20g00911 446 SUPERFAMILY PLP-dependent transferases 41 436 IPR015424 -
Gma20g00911 446 Pfam Aminotransferase class-V 83 277 IPR000192 -
Gma20g00911 446 Gene3D - 64 329 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00911 Gma-Chr20 35648426 35650434 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00911 K22207 - gmx:100796732 892.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g00911 20 35648426 35650434 Gma20g00911 20 35648426 35650434 ECH
Gma19g02140 19 50290329 50292800 Gma20g00911 20 35648426 35650434 PCT
Gma03g02104 03 46586846 46589674 Gma20g00911 20 35648426 35650434 PCT
Gma20g00911 20 35648426 35650434 Gma19g02140 19 50290329 50292800 PCT
Gma20g00911 20 35648426 35650434 Gma03g02104 03 46586846 46589674 PCT