Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02143 ATGAGCAGCAACTCCGGAGCAGTTAAGGGAAGAGAATTCCCTCTTCCTCGCTGCCCCTGCCCCTCCTCAAATTCAAATGCCCCTTCCCTTGATCTCTGGTCACAAATCGTTGCCGCTGAAACTCCCCGCCCCGAACGAATCGACGTCGTTTACCGGAGAAGACACCCTCGCAATCCTCAAAACCACGCCAACTCAAAGCCTCCCGATTCTGCTATACCGCGCCCGCCTCGGCAGAGTTTGGCCGATCCAAACAAGCGAGTCAGTTGGAACCGTTCTCTTTCCACCCGAGGGAGGACAAGTATAGCCGTTGGGGCTTTTATGGTATACCAGCCTCAGTTGAAGAAGGACAAAAGGAAAGGAAAACCCGCTCTTCCCAAAGGAAAGGTTGTGCAACCTCCAAACGTTGACAAGGAGAGGATATACTTTCAAGAGGTTGATGCTTATGAGTTGTTGGAGGAAAGCCCCTCCCCCAAGAAAAGCACATGGACCATAGGAAATATGACACAACAGGAACCAATTCCAGCTGTATGCTCCAGATTAGAAAAATGGTTGCACTCTAGAAGGTTAAACCCCTTCTGCGGTCCATCTAGCACACTATCGAAGATACTGGATACTCCTTCCACACGTTTGGAAACTATTCGTGACATTGACTTCGGTGCTTCTGACTTGAAAACATTGGAACGAACTGACCGAAGCAATTCTCTTCTGCATACCATCAAAACTGAGGAGAAGGAAACTTCTATTGAGAATGGCAGTCATTTGCAAACAAATGAAAAGATGCTGTTTGCTCAAAGTGGTGAAGGATGTGAAGATATTGAAGCTGGTGTTAAGAAACTTTCTCTGGTATCAACGTCATCTTCAATAGATGATGACCACATTAATCCATTTTCTGTTTTATTATCGATTTGTGGACAGTCTGCACCTTCAGTGTTACAAGATATTTTCTCTAGTGGCTCAGAAACTATTGTGAAAGTTGGTGAAGGAACATATGGAGAAGCTTTCAAGATTAACAATTATGTCTGCAAAATAGTTCCTTTTGATGGGGAATTCAGAGTGAATGGGGAAGTCCAAAAGAGATCCGAAGAATTGCTGGAGGAAGTGCTTCTTTGCAAAACTCTCAATCAATTGAGAGGAAAAGATGGAGATTCTGATAATCTTTGCAGCGCATTCATAGATTGCATAGAATTTAGAGTATGTCAGGGCCCTTATGATGCGTCTCTAATTCAAGCATGGGAAGATTGGGATCTTGAGCATGGCTCAGAGAATGATCACCCAAAAGAGTTCCCAGATAAACAGTATTATGTGGTGTTCGTACAAGAACATGGTGGCAAGGATCTTGAAAGTTTTGCACTCCTGAATTTTGACGAGGCAAGGGCTTTACTGGTTCAGGTTACGGCTGGGCTTGCTGTGGCTGAGTCTGCGTTTGAATTTGAACATCGAGATCTTCACTGGGGAAATATACTTGTGGGCCGAAGTGATTCTGAAACGTTGCAGTTCACTCTCGATGGCAAGACTATGTTGGTCAAAACTCATGGATTAATAATATCTATTATTGACTTCACTTTATCAAGAATAAACACAGGTGATAGCATACTGTATTTAGATCTTTCCTCTGATCCTGACCTATTTAAAGGACCGAAAGGGGACAAACAGTCAGAAACATATCGGAGGATGAAGGAGGTGACTGAAGATTGGTGGGAAGGAAGCTGTCCTAAAACAAACGTGTTATGGTTGATCTACTTGGTAGACATACTCCTCATGAAGAAATCATTTGAACGTACTACGAAGCACGAGAGAGATCTACGATCCTTGAAGAAACGTCTTGACAAGTATGATTCGGCCAAGGAAGCAATTCTTGATCCCTTCTTCACTGATTTGTTCCTTTACTCCATTGTTCAACTTGATCCGTACAAGGAACCAATCACACACACCAATATTCCACATTGCATAATGGCCAAGGAACCTTCTCTATGCCTCTTGTTCCTCTCTTTTCTCCTTTTCTGCTCTTCTGGGACTACTGCATCTTCATCATCTGCTGCTACTACATTCTTCCAGAAAAGCAAGATCTCTAAATCTGAGATTCGGTTTTGTGTATCTGATTACAAGTTTTTGAGCACTCTCACCAACACCAACCTGTCAGTTGATTTCTTCTTAAATGAAAGCCTGGTTGAAAATTTTGTTTCTTCAAAATCAAAATCATCTCTGGTTTCATGGCTAGAAACTCGTCTTTTGAACATTTTTCCACAAGTAGACATCAGAAGCATCGTTGTTAGATGTGGCAGTGAGTGCTTACGCCCAGATGAGATGCCTTTGCTCATACCTGTTCTCAAATCAATTCATTCATTTCTCAGCAATCTTCAACTAAGCAGGGAAACTAAAGTCTCCGTGGCTTTTCCACTTTCATTCTTAGAGAATTTGAATGCATCATATGAGAGTGATCTCCTTAGGATTGTTATGTTTTTGAATAAAATAGATTCATTTGTCTTGATAGAAGACATCATTGATGGGGAATCGAGCACTTTTCAGTCTGTTATTGAAAGAGCCACCCTTGCTGCTGCTATTCTTCCCTGCAAAGATGTTCCTGTGGTTTTCACAATCAAGAGCCATGATATTCCAAGTTCAATGGAATTAGCTCAATTTACTGAGGCAGTATCCAAATATCTTGAAGCAGTTTCTCATTTTACAAAGAGAATAGTTGCATTCTATGCACAAGTACGCACAACCAATGATTTTGTACTACTCAAAAAAGAAGAGGGAGAAGAGATATTTCCTTTGTTCCTAAGAGAAAATCCAAGCAAAGTCCACATCAGAAGAACTCTACAAGACACAACCAACTCACCAACCCCACCTTCACCAGTAATCACACCTCCAGATACACCAACCATCATCACAGTTTCCCCCACCAATCCAGCTTCAACACCTGTCACAGTTCCTTCTACCACACCAATTGTTCCCTTAGCCCCTACAAATCCAGCCAATCCGGTTACCAACCCTGTGACCTCTTCTTATCCACCACCATCATCAGGAAGTGTTCCTGTCACAAGTGCACTGCCTCCTCCTCCAAGCACAAATGCTCAAGCCATGCCAGGGGGGCAGAGTTGGTGTGTGGCAAAGACTGGAGTTCCACAAGCTTCTCTTCAATCAGCACTGGACTATGCTTGTGGAATGTCAGGTGTGGATTGTTCACAGATACAGCAAGGTGGGAGTTGTTACAATCCAAATTCATTACAAAACCATGCTTCTTTTGCCTTCAACAACTACTACCAAAAGAATCCTGCGCCAACAAGCTGTGACTTTGGAGGCACTGCCACCATAGTGAACACCAATCCGAGCTCGGGTTCTTGCATCTACCCATCATCTTCAGGGGCAGGCACATCCGGCTCTGGTACTGGTAGCCCAGTTTTAGGGTCCCAAAGCCCTCCTGATTTAAATACCTCCTATTCGGCTAGTCTGAGACCTTTTCTTGGCTGCATGGTTCTGGCAATATCATTAGTCACTGCAAGACTCACTGCATGA 3516 0.4332 MSSNSGAVKGREFPLPRCPCPSSNSNAPSLDLWSQIVAAETPRPERIDVVYRRRHPRNPQNHANSKPPDSAIPRPPRQSLADPNKRVSWNRSLSTRGRTSIAVGAFMVYQPQLKKDKRKGKPALPKGKVVQPPNVDKERIYFQEVDAYELLEESPSPKKSTWTIGNMTQQEPIPAVCSRLEKWLHSRRLNPFCGPSSTLSKILDTPSTRLETIRDIDFGASDLKTLERTDRSNSLLHTIKTEEKETSIENGSHLQTNEKMLFAQSGEGCEDIEAGVKKLSLVSTSSSIDDDHINPFSVLLSICGQSAPSVLQDIFSSGSETIVKVGEGTYGEAFKINNYVCKIVPFDGEFRVNGEVQKRSEELLEEVLLCKTLNQLRGKDGDSDNLCSAFIDCIEFRVCQGPYDASLIQAWEDWDLEHGSENDHPKEFPDKQYYVVFVQEHGGKDLESFALLNFDEARALLVQVTAGLAVAESAFEFEHRDLHWGNILVGRSDSETLQFTLDGKTMLVKTHGLIISIIDFTLSRINTGDSILYLDLSSDPDLFKGPKGDKQSETYRRMKEVTEDWWEGSCPKTNVLWLIYLVDILLMKKSFERTTKHERDLRSLKKRLDKYDSAKEAILDPFFTDLFLYSIVQLDPYKEPITHTNIPHCIMAKEPSLCLLFLSFLLFCSSGTTASSSSAATTFFQKSKISKSEIRFCVSDYKFLSTLTNTNLSVDFFLNESLVENFVSSKSKSSLVSWLETRLLNIFPQVDIRSIVVRCGSECLRPDEMPLLIPVLKSIHSFLSNLQLSRETKVSVAFPLSFLENLNASYESDLLRIVMFLNKIDSFVLIEDIIDGESSTFQSVIERATLAAAILPCKDVPVVFTIKSHDIPSSMELAQFTEAVSKYLEAVSHFTKRIVAFYAQVRTTNDFVLLKKEEGEEIFPLFLRENPSKVHIRRTLQDTTNSPTPPSPVITPPDTPTIITVSPTNPASTPVTVPSTTPIVPLAPTNPANPVTNPVTSSYPPPSSGSVPVTSALPPPPSTNAQAMPGGQSWCVAKTGVPQASLQSALDYACGMSGVDCSQIQQGGSCYNPNSLQNHASFAFNNYYQKNPAPTSCDFGGTATIVNTNPSSGSCIYPSSSGAGTSGSGTGSPVLGSQSPPDLNTSYSASLRPFLGCMVLAISLVTARLTA 1171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02143 1171 SMART X8_cls 1033 1117 IPR012946 -
Gma19g02143 1171 SUPERFAMILY Protein kinase-like (PK-like) 324 532 IPR011009 -
Gma19g02143 1171 MobiDBLite consensus disorder prediction 995 1010 - -
Gma19g02143 1171 PANTHER SERINE/THREONINE-PROTEIN KINASE HASPIN 87 628 - -
Gma19g02143 1171 Gene3D Glycosidases 667 831 - -
Gma19g02143 1171 Gene3D - 1027 1122 - -
Gma19g02143 1171 ProSiteProfiles Protein kinase domain profile. 319 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g02143 1171 SMART serkin_6 319 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g02143 1171 SMART DUF3635_2 540 623 IPR024604 -
Gma19g02143 1171 MobiDBLite consensus disorder prediction 995 1014 - -
Gma19g02143 1171 Gene3D Transferase(Phosphotransferase) domain 1 442 623 - -
Gma19g02143 1171 Pfam X8 domain 1034 1104 IPR012946 -
Gma19g02143 1171 Pfam Haspin like kinase domain 297 616 - -
Gma19g02143 1171 MobiDBLite consensus disorder prediction 51 93 - -
Gma19g02143 1171 Gene3D Phosphorylase Kinase; domain 1 312 441 - -
Gma19g02143 1171 PANTHER INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE 87 628 - -
Gma19g02143 1171 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02143 Gma-Chr19 50307236 50319766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02143 1008 1120 Glycoside Hydrolase AT2G05790 45.299 1.21e-24 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02143 K16315 - gmx:100790036 1239.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02143 19 50307236 50319766 Gma19g02143 19 50307236 50319766 ECH
Gma19g02143 19 50307236 50319766 Gma03g02108 03 46619086 46622904 GST