Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02082 ATGGCTCCTGAACTTGTCCCCACCGTTGCGTTCACGAAACCCGCAACCCTTCCAAGGCGTGCCTACGTGACATTCCTCGCCGGAAACGGTGACTACGTGAAAGGGGTCGTTGGTCTTGCCAAAGGGTTGCGAAAGGTGAAAACCGCGTACCCATTGGTGGTGGCGGTCCTCCCAGATGTGCCGGAGGACCACCGTAAGATCCTGGAGTCTCAGGGCTGCATCGTCCGCGAGATCGAACCCGTTTACCCGCCCGAAAACCAAACCCAGTTCGCCATGGCTTATTACGTCATTAACTACTCCAAGCTCCGTATATGGGAGTTTGTGGAATACACCAAGATGATATACTTGGACGGAGACATTCAGGTATATGAGAACATAGACCACCTATTTGACCTACCTGGTGGTTACTTTTACGCTGTGATGGATTGTTTCTGCGAGAAGACATGGAGTCACACccctcagtacaaggtggggtactgccagcaatgcccggagaaggtgcagtggcccaccgaattgggccagccaccttctctttacttcaacgccggcatgttcgtgTTCGAGCCCAGCATCGCCACCTACCATGACCTATTAAAAACAGTGCAAGTCACCACTCCCACTTCGTTCGCAGAACAAGATTTCTTGAACATGTACTTCAAGGATATTTACAAGCCAATCCCTTTAAATTACAATCTTGTCCTTGCCATGCTCTGGCGCCACCCAGAAAATGTTAAATTAGACCAAGTCAAGGTTGTTCACTATTGCGCAGCGGGGTCGAAACCGTGGAGATATACGGGGAAGGAAGAGAACATGCAGAGGGAGGACATAAAGATGCTGGTGAAAAAATGGTGGGATATCTACAATGATGCTTCGCTTGACTACAAGCCATTGATGAGTGCAAGTGAAGCTCCAGCACCGGATGGTGTTGACAATATTGAACCATTCGTGCAGGCTCTGTCAGAGGTTGGTCATGTTCAATATGTCACTGCGCCCTCAGCAGCTTAA 1008 0.4405 MAPELVPTVAFTKPATLPRRAYVTFLAGNGDYVKGVVGLAKGLRKVKTAYPLVVAVLPDVPEDHRKILESQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYTKMIYLDGDIQVYENIDHLFDLPGGYFYAVMDCFCEKTWSHTPQYKVGYCQQCPEKVQWPTELGQPPSLYFNAGMFVFEPSIATYHDLLKTVQVTTPTSFAEQDFLNMYFKDIYKPIPLNYNLVLAMLWRHPENVKLDQVKVVHYCAAGSKPWRYTGKEENMQREDIKMLVKKWWDIYNDASLDYKPLMSASEAPAPDGVDNIEPFVQALSEVGHVQYVTAPSAA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02082 335 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 18 295 IPR029044 -
Gma19g02082 335 SUPERFAMILY Nucleotide-diphospho-sugar transferases 22 297 IPR029044 -
Gma19g02082 335 Pfam Glycosyl transferase family 8 24 266 IPR002495 GO:0016757
Gma19g02082 335 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 335 - -
Gma19g02082 335 CDD GT8_Glycogenin 20 291 - -
Gma19g02082 335 PANTHER GALACTINOL SYNTHASE 1 1 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02082 Gma-Chr19 49708956 49711087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02082 1 335 Glycosyltransferase AT1G56600 74.852 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02082 K18819 - gmx:100819991 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02082 19 49708956 49711087 Gma19g02082 19 49708956 49711087 ECH
Gma19g02082 19 49708956 49711087 Gma03g02044 03 46021667 46024098 GST