Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02069 ATGGCTCCTCCAAACAATCCAGTGAATTCCACCTTGGGATTTAAGTCACTGGAAAAGGTTTTTGATTTATGTGACGGGAAATTCACCGTGAGAGGTGTGCCATTACTCTCTCAGGTACCCAATAACGTCACTTTCAGTTCCTTCTCCTCAATCTGTGAACCCCGTGACGCCCCACCTTCCATCCTTCAACGTGTCATTGCCGTGTCACACAAAGGTGGCTTCTTCGGATTCTCCCAGGTTTCTCCCTCCGACAGATTAACAAACTCCTTAGGTAGTTTCAGTGGCAGAAACTTCCTTAGCATCTTCAGGTTCAAAACATGGTGGTCTACCCAGTGGGTAGGAAATTCCGGTTCAGACCTTCAAATGGAAACCCAGTGGGTCCTCATAGAAATCCCCGAAATAAAATCCTATGTTGTAATCATTCCCATCATTGAAAAATCTTTCAGGTCCGCACTTCACCCTGGCTCTGATGGCCATGTCATGATTTGTGCTGAGAGTGGTTCAACTCAAGTGAAAGCATCGAGTTTCGGTGCAATTGCTTATGTCCACGTTTCTGAGAACCCTTACAACGTGATGAAAGAAGCCTATAGTGTTCTCAGGGTTCACCTCGATTCGTTCAGGTTGTTGGAGGAGAAAACGGTGCCAAAAATTGCTGACAAGTTCGGTTGGTGCACTTGGGATGCGTTCTACTTAACCGTGAACCCTGTTGGGGTTTGGCATGGGCTTAAGGATTTTGCCGAGGGTGGGGTGGCTCCGAGGTTTGTTATCATTGATGATGGCTGGCAAAGTGTGAATTTTGATGGTGATGACCCCAACGTGGATGCTAAGAATCTTGTTCTTGGCGGGGAACAAATGACTGCGAGGCTTCATAGATTTGAAGAATGTGACAAGTTTGGAAGTTACCAAAAGGGGCTCCTTTTGGGTCCTAATGCTCCTTCTTTTAACCCAAAGACGGTTAAGGAGTTGATTGCGAAGGGGATAGAAGTTGAGCGTTTGGGGAAGCTGCGTGATGAGGCTGTTTCGTCTGGGGTTTCTGATTTGAGTTTGACCGAGATTGAGTCGAGGATTGTGAAGGTGAAAAAGGAAATTGATGATCTCTTTGGTGGGGAGGGAAAGGAGAACAAAGAATTATGTGGAGGGTGTTGTTGCAAAGCAAATGAGTGTGGTGGGATTAAGGCTTTCATAAGGGACTTGAGGACTGAATTCAAAGGTTTGGATGATGTCTATGTGTGGCATGCCCTTTGTGGCTCGTGGGGTGGTGTGAGGCCAGGAGCCACACACTTGAATTCCAAAATAACACCTTGCAAACTCTCCCCTGGCCTTGATGGGACCATGCAAGATCTTGCTGTGGTTAAAATAGTGGAAGGTTCCATAGGACTTGTTCATCCTGATCAAGCTAATGACTTGTACGATTCCATGCACTCTTATCTTGCCCAATCTGGTGTTACCGGAGTCAAAATTGACGTCTTTCATAGTCTTGAATATGTGTGCGAGGAATATGGAGGCAGAGTCGAGCTTGCAAAGGCTTATTACGATGGGTTGACAAACTCTATTGTCAAGAATTTTAATGGAAGTGGAATCATCGCTAGCATGCAGCAGTGCAACGACTTTTTCTTCCTTGGAACCAAGCAAATTCCCATGGGAAGAGTTGGGGATGACTTTTGGTTCCAAGACCCCAATGGGGACCCAATGGGAGTGTTCTGGTTACAAGGGGTGCACATGATTCACTGTGCCTACAACAGTTTGTGGATGGGGCAGATGATTCAGCCCGATTGGGACATGTTCCAATCGGATCATGTGTGTGCCAAATTTCATGCGGGTTCGAGGGCTATTTGTGGCGGTCCTGTCTATGTAAGTGACAGTGTGGGCTCTCATGACTTTGATCTCATTAAGATGCTTGTGTTCCCTGATGGTACCGTGCCCAAATGCATACATTTTGCACTTCCAACAAGAGATTGCCTTTTCAAGAACCCTCTCTTTGACCAAAAAACCGTTCTCAAAATTTGGAACTTCAACAAGTATGGAGGAGTTATTGGTGCTTTCAACTGTCAAGGGGCTGGTTGGGACCCTAAGATGAAGAAGATCAAGGGTTTCTCTGAATGCTACAGGCCAATTTCTTGTACTGTGCATGTAACTGAGGTTGAATGGGACCAAAAGAAAGAAGCAGTTCACATGGGTAAGGCAGAGGAGTATGTCGTGTATCTCAATCAGGCTGAGGAACTGCATTTCATGACCCCAAAGTCTGAACCACTCCAATTTACTATTCAACCTTCCACTTTTGAGATCTACAACTTTGTCCCAGTTGAAAAGCTAGGTGGCAGCATCAAATTTGCACCAATTGGGCTCACAAACATGTTCAACAGTGGAGGGACAATTCAAGAATTGGAGTGTGTTGAGAAGGGTGCAAAGGTTAAGGTTAAGGGTGATGGGAGATTCCTTGCTTACTCAAGTGAATCTCCAAAGAAGTTCCAACTGAATGGTTCTGATGTTGCTTTTGAGTGGCTCCCTGATGGAAAACTCACTCTCAACCTTGCTTGGATTGAAGAGAATGGCGGGGTTTCTGATTTGGCAATTTTCTTCTAG 2583 0.4557 MAPPNNPVNSTLGFKSLEKVFDLCDGKFTVRGVPLLSQVPNNVTFSSFSSICEPRDAPPSILQRVIAVSHKGGFFGFSQVSPSDRLTNSLGSFSGRNFLSIFRFKTWWSTQWVGNSGSDLQMETQWVLIEIPEIKSYVVIIPIIEKSFRSALHPGSDGHVMICAESGSTQVKASSFGAIAYVHVSENPYNVMKEAYSVLRVHLDSFRLLEEKTVPKIADKFGWCTWDAFYLTVNPVGVWHGLKDFAEGGVAPRFVIIDDGWQSVNFDGDDPNVDAKNLVLGGEQMTARLHRFEECDKFGSYQKGLLLGPNAPSFNPKTVKELIAKGIEVERLGKLRDEAVSSGVSDLSLTEIESRIVKVKKEIDDLFGGEGKENKELCGGCCCKANECGGIKAFIRDLRTEFKGLDDVYVWHALCGSWGGVRPGATHLNSKITPCKLSPGLDGTMQDLAVVKIVEGSIGLVHPDQANDLYDSMHSYLAQSGVTGVKIDVFHSLEYVCEEYGGRVELAKAYYDGLTNSIVKNFNGSGIIASMQQCNDFFFLGTKQIPMGRVGDDFWFQDPNGDPMGVFWLQGVHMIHCAYNSLWMGQMIQPDWDMFQSDHVCAKFHAGSRAICGGPVYVSDSVGSHDFDLIKMLVFPDGTVPKCIHFALPTRDCLFKNPLFDQKTVLKIWNFNKYGGVIGAFNCQGAGWDPKMKKIKGFSECYRPISCTVHVTEVEWDQKKEAVHMGKAEEYVVYLNQAEELHFMTPKSEPLQFTIQPSTFEIYNFVPVEKLGGSIKFAPIGLTNMFNSGGTIQELECVEKGAKVKVKGDGRFLAYSSESPKKFQLNGSDVAFEWLPDGKLTLNLAWIEENGGVSDLAIFF 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02069 860 Pfam Raffinose synthase or seed imbibition protein Sip1 23 843 IPR008811 -
Gma19g02069 860 PANTHER - 1 860 IPR008811 -
Gma19g02069 860 SUPERFAMILY (Trans)glycosidases 214 268 IPR017853 -
Gma19g02069 860 SUPERFAMILY (Trans)glycosidases 390 634 IPR017853 -
Gma19g02069 860 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 4-RELATED 1 860 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02069 Gma-Chr19 49589274 49592791 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02069 21 860 Glycoside Hydrolase AT4G01970 59.412 0.0 1048
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02069 K06611 - gmx:100815922 1786.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02069 19 49589274 49592791 Gma19g02069 19 49589274 49592791 ECH