Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01988 ATGGCCACCCTTTCCGCATGCGCTTCCCCTCCATGGCCAAACCCTAATTCTCCCAATTCAAATCCCGACCCTAATTTCCTCCCCGATCAATCCCAAACCCTCGACTTcgactccctcatgcctccgcaacccgaatctccaccgccccaccaccacccctcccccgacgcatcgccgccggaatcctccccatcgctcccgccgccgtcgctcctctacctctccttcaaccaggaccaggcctgcttcgccgccgccgcagacaacggcttccgcatctacaactgcgaccccttccgcgagctcttccggcgcgatttcgacggcggcggaatcggccacgtggagatgcTCTTCCTCTGCAACATCTTCGCCCTCGTCGGCGGCGGGCCTAACCCTCAGTACCCGCCCAACAAGGTCATGATCTGGGACGACCACCAGGGCCACTGCATCGGCGAGCTCTCCTTCCGCGCCGCCGTGCGCGGCGTCCGCCTCCGCCGCGACCGCATCATTGTCGTCGTCGAACAGAAGATCTTTGTCTACAACTTCGCGGACCTCAAGCTCGTGCACCAGATTGAGACCGTTCCAAACCCTAAGGGGCTCTGTGCGGTTTCGCAGCCGTCCGATTCTCTCGTTCTCGCGTGCCCCGGTTTGCACAAGGGTCAGATTCGCGTGGAACACTACGCGCAGAAGAAGACCAAGTTCATCTCAGCGCATGATTCCAGAATCGCTTGCTTCGCTCTCACGCTTGATGGACAGTTAATCGCCACCGCCAGCACCAAGGGTACGCTGATCCGGATTTTCGACACCGATCACGGCACGCTTCTTCAGGAAGTGAGAAGGGGTGCGAATACTGCTGAGATTTGTAGTTTGGCATTCTCTTCTACTGCTCAGTGGCTAGCGGTCTCAAGTGATAAGGGTACTGTCCATGTATTCAGCCTTAAGAAACATTCTAACATCCCCGAGCTGGAAAAGACACAAAGTTCATCCAATTCAGAGGCTGCCGTTACCCCATCTAACTCATCTCGCTCCTTCATTAAATTGAAAGGAGTGTTGCCCAAGTACTTCAATTCTGAGTGGTCAGTTGCTCAGTTTCACTTACAAGAGGGCTCTCATTACACAGTTGCATTTGGTCTCCAAAAGAATACAGTCATTATTCTTGGCATGGATGGAAGCTTCTATAGATGCCAATTTGATCCAGTACGTGGAGGGGAGATGACTCAGCTGGAACATCGCAACTTTTTAAAGCCAGAACCAGAAACAGCCTTGTAA 1272 0.4214 MATLSACASPPWPNPNSPNSNPDPNFLPDQSQTLDFDSLMPPQPESPPPHHHPSPDASPPESSPSLPPPSLLYLSFNQDQACFAAAADNGFRIYNCDPFRELFRRDFDGGGIGHVEMLFLCNIFALVGGGPNPQYPPNKVMIWDDHQGHCIGELSFRAAVRGVRLRRDRIIVVVEQKIFVYNFADLKLVHQIETVPNPKGLCAVSQPSDSLVLACPGLHKGQIRVEHYAQKKTKFISAHDSRIACFALTLDGQLIATASTKGTLIRIFDTDHGTLLQEVRRGANTAEICSLAFSSTAQWLAVSSDKGTVHVFSLKKHSNIPELEKTQSSSNSEAAVTPSNSSRSFIKLKGVLPKYFNSEWSVAQFHLQEGSHYTVAFGLQKNTVIILGMDGSFYRCQFDPVRGGEMTQLEHRNFLKPEPETAL 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01988 423 PANTHER WD REPEAT PHOSPHOINOSITIDE-INTERACTING-LIKE PROTEIN 7 419 - -
Gma19g01988 423 SUPERFAMILY WD40 repeat-like 69 327 IPR036322 GO:0005515
Gma19g01988 423 MobiDBLite consensus disorder prediction 41 66 - -
Gma19g01988 423 Gene3D - 71 401 IPR015943 GO:0005515
Gma19g01988 423 SMART WD40_4 272 313 IPR001680 GO:0005515
Gma19g01988 423 SMART WD40_4 229 269 IPR001680 GO:0005515
Gma19g01988 423 Pfam WD domain, G-beta repeat 282 312 IPR001680 GO:0005515
Gma19g01988 423 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 7 419 - -
Gma19g01988 423 MobiDBLite consensus disorder prediction 23 39 - -
Gma19g01988 423 MobiDBLite consensus disorder prediction 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01988 Gma-Chr19 48937170 48940640 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01988 K22991 - gmx:100807695 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01988 19 48937170 48940640 Gma19g01988 19 48937170 48940640 ECH
Gma19g01988 19 48937170 48940640 Gma03g01951 03 45324664 45327883 GST