Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01962 ATGCAGGAAGCGACGAAGGTGATAATAATCGGTGCCGGAACTTCTGGTATCGCCACCGCCGGTTGCTTAACGAAGCAATCAATACCTTACATAATGCTCGAGAGAGAAGACTGTTTCGCTTCGCTGTGGCAGAAATACACCTACGATCGTCTCCACCTTCATTTGAGGAAGCAAGTTTGCGAGTTACCGCACTTACCGTTTCCCAAGTCTTACCCTCACTACGTGCCTCGGAAGCAGTTCATAGACTACTTGGGAAACTACGTTAACCACTTTGAGATCAAGCCTCTGTACCAGCGTGCAGTGGAGTTGGTGGAGTATGATGGATGGAAAGGGATTTGGAGAGTGAAGGCTCAGAATAGAAGATCTGGTGAGCTTGAGGAATACGCTGGAAAGTACCTGGTCGTGGCCAGTGGCGAAACCGCCGAGCCTCGTCTGCCTCAGATTCAAGGCTTGGAGAGTTTCAATGGAAAAGTGATTCACTCAACTGCCTACAAAAACGGGAACGAGTTTAAGAATAAACATGTTCTGGTTGTCGGATCTGGCAATTCCGGCATGGAGATTGCGCTAGACTTGTCCAATTTTGGTGCCAAACCTTCCATCATTGTTCGCAGCCCGGTTCATTTTCTTTCGAGGGATATGATGTATTATGCGTCGCTTATGCTGAATTACTTGTCGCTGAGTACGGTGGAGAAGGTGTTGGTGATGGTTAGCAAGGTTGTGTATGGAGATCTGAGTGAGTATGGGATACCGTATCCGAGTGAGGGGCCTTTCACCATGAAGATGAAGTATGCCAAGTTCCCAATCATCGATGTAGGAACTGTCAAGAAAATTAAATCTCGAGAGATACAGGTGTTGCCAGCTGAAATAAAGAGTATAAGAGGTAATGAAGTTTTGTTCCAGGATGGCAAATCGTACACATTCGACTCAATTGTTTTCTGTACAGGCTTCAAGAGATCAACTCAAAAGTGGCTTAAGGGGGGTGATGATCTTCTAAATGAGGATGGCTTTCCAAAAAACAGTTTCCCAAATCATTGGAAAGGTCGAAATGGTTTGTATTGTGTTGGGCTGTCAAGAAGGGGTTTCTTTGGAGCTAACATGGATGCCCAATTAGTAGCAAATGATATTGCCTCGTTAATTCCTCAAGAAGAAAGAGAAGGAATTTGTGTCATGTAA 1173 0.4518 MQEATKVIIIGAGTSGIATAGCLTKQSIPYIMLEREDCFASLWQKYTYDRLHLHLRKQVCELPHLPFPKSYPHYVPRKQFIDYLGNYVNHFEIKPLYQRAVELVEYDGWKGIWRVKAQNRRSGELEEYAGKYLVVASGETAEPRLPQIQGLESFNGKVIHSTAYKNGNEFKNKHVLVVGSGNSGMEIALDLSNFGAKPSIIVRSPVHFLSRDMMYYASLMLNYLSLSTVEKVLVMVSKVVYGDLSEYGIPYPSEGPFTMKMKYAKFPIIDVGTVKKIKSREIQVLPAEIKSIRGNEVLFQDGKSYTFDSIVFCTGFKRSTQKWLKGGDDLLNEDGFPKNSFPNHWKGRNGLYCVGLSRRGFFGANMDAQLVANDIASLIPQEEREGICVM 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01962 390 Pfam Flavin-binding monooxygenase-like 5 317 IPR020946 GO:0004499|GO:0050660|GO:0050661
Gma19g01962 390 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 3 390 - -
Gma19g01962 390 PIRSF FMO 3 370 IPR000960 GO:0050660|GO:0050661
Gma19g01962 390 PRINTS FAD-dependent pyridine nucleotide reductase signature 7 26 - -
Gma19g01962 390 PRINTS FAD-dependent pyridine nucleotide reductase signature 174 192 - -
Gma19g01962 390 SUPERFAMILY FAD/NAD(P)-binding domain 171 379 IPR036188 -
Gma19g01962 390 Gene3D - 1 381 IPR036188 -
Gma19g01962 390 PANTHER FLAVIN-CONTAINING MONOOXYGENASE 3 390 - -
Gma19g01962 390 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Gma19g01962 390 PRINTS Pyridine nucleotide disulphide reductase class-II signature 6 28 - -
Gma19g01962 390 PRINTS Pyridine nucleotide disulphide reductase class-II signature 170 194 - -
Gma19g01962 390 SUPERFAMILY FAD/NAD(P)-binding domain 3 215 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01962 Gma-Chr19 48719270 48722218 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01962 K11816 - gmx:100777958 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01962 19 48719270 48722218 Gma19g01962 19 48719270 48722218 ECH
Gma19g01962 19 48719270 48722218 Gma03g01922 03 45089813 45093262 GST