Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01930 ATGAAATTCGGGTCTGCATTCAGAGAATATCTGCAGGAGGAACGGGAGTGGCTCGTGGACCAGAAATGTGCCCACGTTGAATATATAAGGTTAAAGAAAGTGTTGAAGACTTGCCAGAAAGATACCTCTTCTTCTGATAACAAGGACCAGTTATGTCACTGTCAGTCTTGCCCATTGTGTGATCAACAGTTCTTCTCTGAGTTGATGAAGGAAGCATCAGATGTAGTAGGATACTTTAGTTCAAGAGTTAAGAATCTCCTTCATCTTCATATTGCAACAGGAATGCAGAGATATGTATTGCGTTTGCGCCAGTGCTTTAAAGATGATAGGCAAGCCCTTACCCAAGAAGGGAGGATTCTAATTGAGTACATTGCAATGAATGCTATTGCAATGAGGAAAATACTTAAGAAATATGATAAAGTACACAGCTCTGTGAATGGAGAGAATTTCAAATCTAGGATGCATGCCGAACACATTGAAATTTTGCACTCACCTTGGCTAATTGAGTTGGGTGCTTTTTATCTGAATTCTAGTGGACTGGATAGTTGTGACCTTGATGGAGTCTATGGTCGCTTTTCATGTGAGCTAAACATAACTAAAGCTGTAATGACATTGGTTCTTCCCGATTCTATTAATCTCGAGCATGATCTTACTTGTGCAATTTGCCTGGATTTTGTTTTCAACCCATATGCTTTGAGTTGTGGTCATATCTTCTGCAAGTCATGTGCTTGCTCAGCTGCCTCTGTGATGATTTTTCAAGGCCTTAAAGCTGCAAGTCCTGAGTCAAAGTGTCCTATATGCAGAGAGGTTGGAGTTTATTCTAAGGCCGTGCATATGTTAGAACTTGATCTGCTTGTGAAAAGAAGGTGCAAAGACTACTGGAAAGAGAGGCTAGCTGGTGAACGGGGTGATAAGTTGAAGCAATCCAATGACTACTGGAATTTACAGTCCACATATTCAATTGGATTGATTAGTAGTAGTCTTAAGCAAAAGCAGCATCAACATGTCAAATTTCTCTTCCTGGTTCTTCGCCCAAGTACTTGTACTGCTAGATCACTCGCTCTTCAACGTCACTTCAATTCTTCCTTCTGCGACACCCACAGAGGTTTGGGTGTTAGGAACAAAGGCAGCACGCAATACGTTGTTAAGGGATCACAGAAAGAATTTCCGCGGGAGCTTCTTCAGGAGTTGAAAATCGTCTGTCAGGTCCTGGTGGTAGCATTGGAGGCATGTGTGCTACATGTTGCTCTGGTTCGCCAGCTGTATGGCACTATGCGTGATAATGTCATCAGTCTCAAGGTGGTTCTTGCCAATGGAGACATTGTGAAGACTGCATCACGTGCTAGGAAGAGTGCTGCATGGTCCATGACCATGAGAGACATTGATAACGGTGAAAAGGAACAGTACAAAACAAATATTCGGATTTCGGCGAGCTAG 1437 0.4245 MKFGSAFREYLQEEREWLVDQKCAHVEYIRLKKVLKTCQKDTSSSDNKDQLCHCQSCPLCDQQFFSELMKEASDVVGYFSSRVKNLLHLHIATGMQRYVLRLRQCFKDDRQALTQEGRILIEYIAMNAIAMRKILKKYDKVHSSVNGENFKSRMHAEHIEILHSPWLIELGAFYLNSSGLDSCDLDGVYGRFSCELNITKAVMTLVLPDSINLEHDLTCAICLDFVFNPYALSCGHIFCKSCACSAASVMIFQGLKAASPESKCPICREVGVYSKAVHMLELDLLVKRRCKDYWKERLAGERGDKLKQSNDYWNLQSTYSIGLISSSLKQKQHQHVKFLFLVLRPSTCTARSLALQRHFNSSFCDTHRGLGVRNKGSTQYVVKGSQKEFPRELLQELKIVCQVLVVALEACVLHVALVRQLYGTMRDNVISLKVVLANGDIVKTASRARKSAAWSMTMRDIDNGEKEQYKTNIRISAS 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01930 478 SUPERFAMILY FAD-binding/transporter-associated domain-like 420 455 IPR036318 GO:0050660
Gma19g01930 478 CDD SPX_BAH1-like 2 147 - -
Gma19g01930 478 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 201 320 IPR013083 -
Gma19g01930 478 ProSiteProfiles SPX domain profile. 1 152 IPR004331 -
Gma19g01930 478 ProSitePatterns Zinc finger RING-type signature. 234 243 IPR017907 -
Gma19g01930 478 Gene3D - 392 470 IPR016169 -
Gma19g01930 478 ProSiteProfiles Zinc finger RING-type profile. 219 268 IPR001841 -
Gma19g01930 478 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 322 IPR033326 -
Gma19g01930 478 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1-LIKE-RELATED 1 322 - -
Gma19g01930 478 SMART ring_2 219 267 IPR001841 -
Gma19g01930 478 Pfam RING-type zinc-finger 219 265 IPR027370 -
Gma19g01930 478 SUPERFAMILY RING/U-box 211 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01930 Gma-Chr19 48492064 48504317 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01930 K16275 - gmx:100781704 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01930 19 48492064 48504317 Gma19g01930 19 48492064 48504317 ECH