Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01855 ATGGTTCTTCCAAAGTGTCGCTATATCACTGTAGTGTTTTTTGCCTTTGTTGTGTTACTGATCAACAATGGCGTTGAAGCTTTTCATAAAGTATATCCTCATCTTCAATCTGTTTCAACGATTTCCGTGAGCAGACAACACAGAACTGCATACCATTTCCAACCTCCTAAGAACTGGATCAACGGACCCATGTACTACAATGGAATCTATCATTTAttctaccaatacaaccccaaaggctcagtgtggggtaacattgtgtgggcccactcaatatcaaaggatctcatcaattggaggacccttgaacctgccctatatccatccaaaccatttgacaagtttggttgttggtctgggtcagccaccatagtcccaggtaaaggacctgtgatcctctacaccggagttgttgacgacaaacaaactcaggttcaatgctacgccgtacccgaagacctaaatgacccactcctccgaaaatgggttaaacctgacaaattcaacccgatcttggttgctaacaaaggtgttaatggtagtgcctttcgcgacccaaccacggcatggtggagcaaggatgggcactggaagatattggtgggtagtagaaggaagcgtagaggtatagcttatttgtacagaagcaaggactttatgacttgggttcaagccaaacatccgatccattccaagggtgagacaggtatgtgggagtgtcctgatttttatccagttttggttaatggcaatcaaggattggagacgtccgagggagggaatcatgtgaagcacgtgtttaagaatagtcttgacatgactaggttcgactactacaccgtaggaacatattttgaagataaggatagatatgtcccagataacacttcagtggatggttggggtggacttaggtatgaccatggtAATTTCTATGCTTCAAAATCGTTTTTTGACCCCAGTAAGAACAGAAGGATCTTGTGGGGTTGGGCAAACGAGTCTGATACCAAGGAAGATGATGTTCGCAAAGGATGGGCAGGAATTCAGGCAATTCCGCGAACTGTGTGGCTCGATTCTActgggagacaattggtgcaatggcctgttgaagaattaaataatctcagagggaaagaagttaatatgaacagtcaaaagcttcaaaagggagattacgttgaagtaaaaggaatcaccgctgcccagGCAGATGTGGAAGTTACATTCTCATTTGCAAGCTTGGACAAGGCAGAGACATATGATCCTAAGTGGGTAAATGCACAGGACCTCTGTGCCCAAAAGGGTTCAAAACTTCAAGGTGGGGTTGGACCATTTGGGCTTCTCACATTAGCTTCTCAAAATTTAGAGGAGTTCACCCCTGTGTTTTTTAGAATTTTCAAAGGTCCAGTTAAGCATGTGGTTCTCTTATGCTCCGATGCAACAAGTTCCTCTTTGAAGAGTAATATGTACAAGCCATCATTTGCTGGCTTTGTAGATGTGGATTTGGCCACTAATAAAAAACTCTCTCTTAGGAGTTTGATTGATCACTCAGTAGTGGAGAGTTTTGGTGAAGGAGGGAAGACAAACATTTTGTCTCGGGTTTATCCACAGTTAGCAGTGGCTAATCAAGGTCACTTGTTTGTGTTCAACAACGGAACTGAACCCATCTCGGTGGAAAACCTCAAAGCATGGAGCATGAAGCCGGCTGATATAAAATAA 1719 0.2147 MVLPKCRYITVVFFAFVVLLINNGVEAFHKVYPHLQSVSTISVSRQHRTAYHFQPPKNWINGPMYYNGIYHLFYQYNPKGSVWGNIVWAHSISKDLINWRTLEPALYPSKPFDKFGCWSGSATIVPGKGPVILYTGVVDDKQTQVQCYAVPEDLNDPLLRKWVKPDKFNPILVANKGVNGSAFRDPTTAWWSKDGHWKILVGSRRKRRGIAYLYRSKDFMTWVQAKHPIHSKGETGMWECPDFYPVLVNGNQGLETSEGGNHVKHVFKNSLDMTRFDYYTVGTYFEDKDRYVPDNTSVDGWGGLRYDHGNFYASKSFFDPSKNRRILWGWANESDTKEDDVRKGWAGIQAIPRTVWLDSTGRQLVQWPVEELNNLRGKEVNMNSQKLQKGDYVEVKGITAAQADVEVTFSFASLDKAETYDPKWVNAQDLCAQKGSKLQGGVGPFGLLTLASQNLEEFTPVFFRIFKGPVKHVVLLCSDATSSSLKSNMYKPSFAGFVDVDLATNKKLSLRSLIDHSVVESFGEGGKTNILSRVYPQLAVANQGHLFVFNNGTEPISVENLKAWSMKPADIK 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01855 572 Pfam Glycosyl hydrolases family 32 C terminal 371 565 IPR013189 -
Gma19g01855 572 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE PROTEIN 2 572 - -
Gma19g01855 572 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 2 572 - -
Gma19g01855 572 Gene3D Glycosyl hydrolase domain; family 43 57 381 IPR023296 -
Gma19g01855 572 SMART glyco_32 52 526 IPR001362 GO:0004553|GO:0005975
Gma19g01855 572 Gene3D - 382 566 - -
Gma19g01855 572 Pfam Glycosyl hydrolases family 32 N-terminal domain 52 368 IPR013148 -
Gma19g01855 572 SUPERFAMILY Concanavalin A-like lectins/glucanases 368 568 IPR013320 -
Gma19g01855 572 CDD GH32_Fruct1-like 58 357 - -
Gma19g01855 572 SUPERFAMILY Arabinanase/levansucrase/invertase 43 369 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01855 Gma-Chr19 47770256 47775290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01855 24 566 Glycoside Hydrolase AT2G36190 63.620 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01855 K01193 - gmx:100799008 1125.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01855 19 47770256 47775290 Gma19g01855 19 47770256 47775290 ECH
Gma19g01855 19 47770256 47775290 Gma03g01813 03 44169618 44173750 GST