Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01854 ATGTCTTCGAAAGAGAAGGGCGTCAACGTTCAGGTCCTCCTCCGTTGCAGGCCCTTTAGCGACGAAGAGTTACGGAGCAATGCTCCGCAAGTCGTGACTTGCAACGAATACAATCGAGAAGTGGCCGTGTCACAGAGCATCGCCGGCAAGCACATCGACAGGGTTTTCACCTTCGATAAGGTTTTTGGTCCTTCTGCACAGCAAAGGGATCTTTATGATCAAGCTGTTACTCCGATAGTTAATGAAGTTCTAGAGGGATTTAATTGCACTATATTCGCGTATGGTCAAACTGGTACGGGAAAAACCTACACAATGGAAGGGGAATGCAAAAAGGCCAAGAGTGGTCCCAATGGAGAGTTGCCTCCAGGAGCTGGAGTTATTCCTAGGGCTGTCAAGCAGATTTTTGACACACTTGAGAGCCAGAATGCTGAGTACAGTGTGAAGGTCACCTTTTTGGAATTGTATAATGAAGAAATCACTGATTTGCTTGCCCCAGAGGAGCTTTTAAAGGCTTCTTTGGAGGAGAAGCAGAAGAAGCAGCTGCCTCTCATGGAGGATGGTAAAGGTGGAGTTCTAGTAAGAGGCTTGGAGGAAGAGATTGTGACGAGTGCCAGTGAGATTTTTACTCTTCTGGAGAGAGGGTCTTCTAAACGACGAACTGCAGAAACTTTGTTGAACAAGCAGTCAAGTCGATCGCATTCGTTGTTTTCCATTACAATCCACATCAAAGAAGCAACCCCAGAGGGTGAAGAACTGATAAAGTGTGGTAAACTTAATTTGGTGGATCTTGCTGGGTCAGAAAATATATCTCGTTCTGGTGCTAGGGAGGGTCGTGCAAGGGAAGCAGGGGAAATTAACAAAAGTTTGCTTACTTTAGGGCGAGTGATCAATGCACTAGTGGAGCACCTGGGTCACATCCCTTACAGGGATAGTAAATTGACGCGTTTACTGCGTGATTCACTTGGGGGAAGAACGAAAACATGCATCATAGCGACAGTGTCTCCTGCTGTTCATTGCTTAGAAGAAACTTTAAGCACGCTGGATTATGCACACAGGGCAAAGCACATAAAAAATAAGCCTGAGGTTAACCAAAAAATGATGAAATCAACACTTATCAAGGATCTTTATGGTGAAATTGAACGCCTTAAGGCAGAGGTTTATGCTACACGCGAGAAAAATGGAGTGTATATTCCGAAGGAAAGATACTATCAGGAGGAGAGTGAAAAGAAGGCTATGTCAGATCAAATTGAGCAGATGGGTGTCACAATAGAAACTCAACAGAAGCAACTTGAGGATTTGCAAAACAAATACGTTGACCAAATTCGGCAGTGTTCAGATTTGAGCAACAAACTTGATAGTACTGAGAAAAACTTGAACAAGACTAGCAAGTTGCTTGCCAACACAGAGGAAGAATTGAAGAAATGTCAGTATACCCTGAAAGAAAAAGACTTCATCATTGCTGGGCAGAGAAAAGCAGAAAATGCTCTGGCTCATCAAGCATGTGTTTTACGAGCTGATTTGGAGAAAGCTCATCAGGATAATGCTTCGTTATTTTTTAAAATTGGTAGAGAAGATAAATTGAACTCAGATAACAAAGCTGTAGTGAACAATTTCCAAGCGGAGCTTGCTCAGCAGGTTGGTTCACTTTGCAATACTGTTGCAACATCATTGTCTGAACAGAATGAACATCTAGAAGGTGTGAAGAAGCTCTGTCATTCTTTTTTGGACGTTCATGATAAGGCGGTTGTCGATTTGAAAAGGAAAGTCACATCTCTGAGGGCCTTATATATATCTCATTTCGAGGCAGTGGAAAATGTTGTGCGCTTGCATAAGGCGGGCTCTGATGCTAACTTGGAGGAACTATCATCTGTTATATCCTCTAATGGTCATTCTATTGAAGAATTTCTTGCATCTGAAGCCACTGAAGCTGGTTCAATATTTGACAATCTTCAGAGTACCCTTTCAACTCAGCAGGGTGAATTGGCACTATTTGCAAGGGAACTACGCAATAGATTCAATCTCAGCCTCGAACAAATAAAGGATATCTCTGATCGCTCTCAAGAATTTGTGGATAAGCTTTTTGAAGAATCAAAGAAGCTTGAAGACTATGCATCACAGGCTGACCAAATGCAATTGAAGAGCATTGATGAGTTTAAGAAAGCATACGAGGAACAATCAAAATCTGATACAGAGAAACTTATTGCCAATATGACTAGTTTAGTTTCAGATCACATTCGGCGACAAATGGATCTGGTAGACGCAAAGCTTGTTGATCTTAGAGAAAGTGGCATCAAGAACAAGTCCTTCTTGGATGGACATGTGTCATCAGTGGGAGACATTGTGACCAATGGAAAAAGAAAATGGCAGGCCTTTTGCGAGCATGCAGAAAAGGATGCAAAAGACACTGCTGATTATTCTGCCGCAAAGCATTGTCGTATGGAGGTGCTCATGCAGCAGAGTGTTAATACTGCTCAATCGGCTTTCGAACATACAAAGAGAACACACGAGGCTATAATTGAGATGGGGACCAAACATATTTCAGCAACAGAGTCAATTGTCAGGAATGCTACTGATAACAATGTGCAACATGTCGTTGAGGTTGATTCTGCACGAGTTGCAGCAGAGGAAGATGTGGCAAAGAACAGTGAGGATCTTCTTGAGCAGTTAGATGTCACGTCTGCACAAGAGCGGGAGTCCATATCTGGCGTATTAAATGTGGTGAGAACTCATGCAAATACACTTGAGACGCTACGGGAGGATCACGCTGGCCAAGCTACTTCAATTGAACACACAACAAGCGAAACTTTTCAACGGCAGTACAGGGACTATGAGCCTAGCGGCACAACACCTATAAGATGTGAGCCTGATGTTCCGACAAAGGGGACAATAGAGTCTCTTCGATCGTTGCCAATGGAAGCCCTGCTTGAGGAATTCCGAGAAAATAATCCATATGAATATAATGATGTAAAGGAGTTGAAACCATCTCTTATTCCACGATCGCCTCTTACTCAGCTGAACTAA 3021 0.4293 MSSKEKGVNVQVLLRCRPFSDEELRSNAPQVVTCNEYNREVAVSQSIAGKHIDRVFTFDKVFGPSAQQRDLYDQAVTPIVNEVLEGFNCTIFAYGQTGTGKTYTMEGECKKAKSGPNGELPPGAGVIPRAVKQIFDTLESQNAEYSVKVTFLELYNEEITDLLAPEELLKASLEEKQKKQLPLMEDGKGGVLVRGLEEEIVTSASEIFTLLERGSSKRRTAETLLNKQSSRSHSLFSITIHIKEATPEGEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHLGHIPYRDSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLSTLDYAHRAKHIKNKPEVNQKMMKSTLIKDLYGEIERLKAEVYATREKNGVYIPKERYYQEESEKKAMSDQIEQMGVTIETQQKQLEDLQNKYVDQIRQCSDLSNKLDSTEKNLNKTSKLLANTEEELKKCQYTLKEKDFIIAGQRKAENALAHQACVLRADLEKAHQDNASLFFKIGREDKLNSDNKAVVNNFQAELAQQVGSLCNTVATSLSEQNEHLEGVKKLCHSFLDVHDKAVVDLKRKVTSLRALYISHFEAVENVVRLHKAGSDANLEELSSVISSNGHSIEEFLASEATEAGSIFDNLQSTLSTQQGELALFARELRNRFNLSLEQIKDISDRSQEFVDKLFEESKKLEDYASQADQMQLKSIDEFKKAYEEQSKSDTEKLIANMTSLVSDHIRRQMDLVDAKLVDLRESGIKNKSFLDGHVSSVGDIVTNGKRKWQAFCEHAEKDAKDTADYSAAKHCRMEVLMQQSVNTAQSAFEHTKRTHEAIIEMGTKHISATESIVRNATDNNVQHVVEVDSARVAAEEDVAKNSEDLLEQLDVTSAQERESISGVLNVVRTHANTLETLREDHAGQATSIEHTTSETFQRQYRDYEPSGTTPIRCEPDVPTKGTIESLRSLPMEALLEEFRENNPYEYNDVKELKPSLIPRSPLTQLN 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01854 1006 PANTHER KINESIN MOTOR DOMAIN-CONTAINING PROTEIN-RELATED 2 1006 - -
Gma19g01854 1006 Coils Coil 416 471 - -
Gma19g01854 1006 CDD KISc_BimC_Eg5 7 365 - -
Gma19g01854 1006 PRINTS Kinesin heavy chain signature 86 107 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma19g01854 1006 PRINTS Kinesin heavy chain signature 306 327 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma19g01854 1006 PRINTS Kinesin heavy chain signature 257 275 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma19g01854 1006 PRINTS Kinesin heavy chain signature 223 240 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma19g01854 1006 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 396 IPR027417 -
Gma19g01854 1006 ProSiteProfiles Kinesin motor domain profile. 9 356 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma19g01854 1006 SMART kinesin_4 7 364 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma19g01854 1006 Gene3D Kinesin motor domain 1 387 IPR036961 -
Gma19g01854 1006 Coils Coil 372 392 - -
Gma19g01854 1006 Pfam Kinesin motor domain 15 356 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma19g01854 1006 PANTHER KINESIN-LIKE PROTEIN KIF11 2 1006 - -
Gma19g01854 1006 ProSitePatterns Kinesin motor domain signature. 256 267 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01854 Gma-Chr19 47760282 47766208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01854 1 386 Miscellaneous Gene Families AT5G06670 37.594 4.17e-67 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01854 K10398 - gmx:100800246 1940.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01854 19 47760282 47766208 Gma19g01854 19 47760282 47766208 ECH
Gma19g01854 19 47760282 47766208 Gma03g01812 03 44157293 44163322 GST