Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01850 ATGACGGAAGTGCTTCAGTTGCCTTCATCCTCAAGCTGTTCGCGTCGTCCATGTGGTAGTCTCACACCCAATGATGGGTCGCACCCAATTTCCCTTATTAACGCTCCTCCCACTGTGGAAGATCAAAGGGTGGAAATTGAAGAAGAAGAAGAGAAAGAAAGGGAAAGGGAGAGGGATCAGCTTTCTATTTTGACCCTTTTGATTGCTACGTTCAGGAAATCTTTGATTGGGTGCAGCACCACTACAActtcttcttcttcttcttcttcttcttcttcttcttcCATGGAGATTGGGTGGCCTTCCAATGTGAGACACGTGGCACATGTCACCTTTGATCGCTTCCATGGCTTTCTCGGTTTGCCTGTTGAGTTCGAACCCGAAGTTCCCAGGAGACCTCCCAGCGCTAGTGCAAATGTTTTTGGAGTTTCAACAGAATCTATGCAGCTTTCTTTTGATGCCAGAGGGAATAGTGTACCTACAATACTGCTGTTAATGCAAAGACATTTGTATGCACAAGGAGGTCTGCAGGCTGAAGGAATCTTCAGAATTAATGCTGAAAATGGTCAAGAGGAGTTTGTGAGGGAACAATTAAACAGAGGTGTAGTACCAGATGGCATTGATGTGCACTGCTTGGCAGGTCTCATAAAGGCTTGGTTTAGAGAACTACCAACTGGAGTATTGGACCCTCTTTCGCCAGAGCAGGTGATGCAATCCCAGTCAGAAGAAGAATGTGCTCAGCTTGTGAGGCTTCTTCCTCCAACAGAAGCTGCTTTGCTAGATTGGGCAATAAACTTAATGGCAGATGTTGCTCAAATGGAAAACTTGAACAAGATGAATGCACGTAATATTGCAATGGTTTTTGCACCAAACATGACTCAAATGGCAGATCCTTTGACTGCTTTGATGTATGCAGTACAAGTCATGAATTTTCTCAAGACTCTTGTTGTGAAGGCATTGAGAGAAAGAGAGGAATCTATTGTAAAATCAAATCCTGTTCCTGACCTTAATTCTTTTGACGATGATGGGAACCATAGCAATTCAGAAATGCTTGACAAGGAGGACAGTGAAAATGGAAATGATTGTAGCGATGACGATGAAGATACAGTGTTTGTCACTGCAGAGCCTTCTCAACAAAGCCCTAGTCATCTTACAGAAGATGGTTGTGAAACTGAAACCGCGACCAAATCCAAAAGTTTGCCAGCATCTACTGAGAACTATATTTCAAGTGGAAATAGGTTGCTGGTTGACAGTTGTCCTTGCAATCTTGTATCTCAAATTTGCTCTTTGGCAATTGGACTTCAAGACTGTGGCCTCGCTACCGGGCAGACAAAGGGGGATCAAGCAAAAATTTGCAGGAGCAAAAGCCTTCAGTTGAGCACTTATGACACGGACAAGTGTTCCAGAAAGGTGATTCAGCTTCCAGTAACCGGAGCTGCAGAGAAGAACCTTGGAATGGCAATTATTGAGCGTATAAATTCGAGAACGGAGTTGGCTGAAGCTTGGCGTTGA 1512 0.4312 MTEVLQLPSSSSCSRRPCGSLTPNDGSHPISLINAPPTVEDQRVEIEEEEEKERERERDQLSILTLLIATFRKSLIGCSTTTTSSSSSSSSSSSSMEIGWPSNVRHVAHVTFDRFHGFLGLPVEFEPEVPRRPPSASANVFGVSTESMQLSFDARGNSVPTILLLMQRHLYAQGGLQAEGIFRINAENGQEEFVREQLNRGVVPDGIDVHCLAGLIKAWFRELPTGVLDPLSPEQVMQSQSEEECAQLVRLLPPTEAALLDWAINLMADVAQMENLNKMNARNIAMVFAPNMTQMADPLTALMYAVQVMNFLKTLVVKALREREESIVKSNPVPDLNSFDDDGNHSNSEMLDKEDSENGNDCSDDDEDTVFVTAEPSQQSPSHLTEDGCETETATKSKSLPASTENYISSGNRLLVDSCPCNLVSQICSLAIGLQDCGLATGQTKGDQAKICRSKSLQLSTYDTDKCSRKVIQLPVTGAAEKNLGMAIIERINSRTELAEAWR 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01850 503 CDD RhoGAP 160 315 - -
Gma19g01850 503 Gene3D CRIB domain 92 127 IPR036936 -
Gma19g01850 503 CDD CRIB 96 136 - -
Gma19g01850 503 Pfam RhoGAP domain 160 294 IPR000198 GO:0007165
Gma19g01850 503 SMART RhoGAP_3 157 320 IPR000198 GO:0007165
Gma19g01850 503 PANTHER MKIAA1688 PROTEIN 1 503 IPR044785 GO:0005096
Gma19g01850 503 Gene3D Rho GTPase activation protein 131 329 IPR008936 GO:0007165
Gma19g01850 503 ProSiteProfiles CRIB domain profile. 98 111 IPR000095 -
Gma19g01850 503 MobiDBLite consensus disorder prediction 372 403 - -
Gma19g01850 503 PANTHER RHO GTPASE-ACTIVATING PROTEIN 1 1 503 - -
Gma19g01850 503 Coils Coil 39 59 - -
Gma19g01850 503 MobiDBLite consensus disorder prediction 1 31 - -
Gma19g01850 503 MobiDBLite consensus disorder prediction 1 58 - -
Gma19g01850 503 Pfam P21-Rho-binding domain 97 123 IPR000095 -
Gma19g01850 503 SMART PBD_5 98 132 IPR000095 -
Gma19g01850 503 ProSiteProfiles Rho GTPase-activating proteins domain profile. 143 328 IPR000198 GO:0007165
Gma19g01850 503 SUPERFAMILY GTPase activation domain, GAP 138 316 IPR008936 GO:0007165
Gma19g01850 503 MobiDBLite consensus disorder prediction 331 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01850 Gma-Chr19 47740335 47744182 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01850 - - gmx:121172725 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01850 19 47740335 47744182 Gma19g01850 19 47740335 47744182 ECH
Gma19g01850 19 47740335 47744182 Gma03g01809 03 44137575 44141604 GST