Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01849 ATGTACTGGGAGCACTCACATAAGCTCCTTTTGGGAAGGGAATGGAAAGGACAAGGTGTAAAGGGGAGGTCTCTATTTGTGTTTCCACGTTTGGAAATGCTTGCTACTGGTTTGGTGTGTGTTTTTATGTTATTGTTTCTGGATGCATGCCACGCTCCCGCCATTTCTCCACTCTCCCCCTTTCTTTCTCTCAAAACAAAAACCTTGCGCTCTTCTTCTGCCAAATCAATTAAGCTTTCCTCTCCTTGGACCAACGCTTCCTTGACTTCCCCAAACTGTTTCGCGAAAGAGGTATGGGGTTGGGTGAACTCCAACTCCAAGGGCGTCGCCGCGAGAAGGGACACCCGCGGAGTGGTGGTGAAGGCTGAAATGTTCGGCCAATTGACTAGTGGCCTTGAGACTGCATGGAACAAGCTCAAAGGAGAAGAGGTTTTGTCTAAAGAGAACATTGTGGAGCCCATGCGAGATATTAGGAGAGCTCTCTTAGAAGCTGATGTTAGTCTTCCTGTTGTCAGAAGGTTTGTGCAGTCTGTCAGTGATCAGGCTGTGGGTGTTGGTGTCATTCGAGGAGTGAGACCGGATCAGCAATTGGTTAAGATTGTACATGATGAACTTGTACGATTGATGGGTGGAGAAGTTTCTGAACTGGTTTTTGCCAAATCTGGGCCCACTGTCATTTTATTGGCTGGACTTCAGGGAGTTGGGAAGACAACGGTTTGCGCAAAGTTGGCAAATTATCTCAAGAAACAGGGAAAAAGTTGCATGCTAGTTGCTGGGGATGTTTACAGACCTGCTGCTATTGACCAGCTTGCTATTTTGGGAAAACAGGTGGATGTGCCTGTCTATACAGCAGGTACCGATGTTAAACCTTCAGAAATTGCGAAACAAGGTTTAGAAGAGGCAAAAAAGAAGAAAATTGATGTTGTTATTGTTGATACTGCTGGTAGGCTGCAGACAATGATGGATGAGTTAAAAGAAGTGAAAAAGGCATTGAATCCAACAGAAGTGTTGCTAGTTGTGGATGCAATGACAGGGCAAGAAGCTGCAGCGTTGGTGACTACTTTCAATCTTGAGATTGGAATAACAGGTGCCATCTTGACAAAGCTTGATGGTGATTCAAGAGGTGGAGCAGCTTTGAGTGTCAAAGAGGTATCCGGAAAGCCAATTAAACTTGTAGGACGGGGTGAACGCATGGAGGATCTTGAACCTTTCTACCCTGATCGGATGGCAGGACGCATTCTAGGAATGGGAGATGTTCTTTCTTTTGTAGAGAAGGCACAACAAGTTATGCGTCAAGAAGATGCTGAAGAACTGCAAAAGAAGATCATGAGTGCAAAGTTTGACTTCAATGATTTTCTAAAGCAAACCCGTACTGTTGCAAAAATGGGTTCTGTCTCTCGTGTCATTGGAATGATTCCTGGTATGGGGAAGGTTACTCCTGCTCAAATTCGAGATGCAGAGAAGAATTTGCAGAACATGGAAGCTATGATAGAAGCAATGACCCCTGAGGAGAGGGAAAAGCCAGAACTGTTGGCAGAATCCCCTGTCAGGAGGAAAAGAGTTGCTCAGGATTCAGGGAAAACAGAGCAGCAGGTAAGCCAACTTGTAGCTCAACTTTTCCAAATGCGTGTTCGTATGAAGAACCTGATGGGTGTAATGGAAAGTGGATCACTTCCAACACTTAGTAATCTTGAGGAAGCGCTTAAAGCAGAGGAAAAGGCCCCACCTGGCACTGCAAGGAGGAGGAAGAGATCGGAATCAAGGAGTGTATTTGGGGACTCAACACCAGCAAGGTCAAGTCCTCGTGGTTTTGGGAGCAAAAATTGA 1827 0.4559 MYWEHSHKLLLGREWKGQGVKGRSLFVFPRLEMLATGLVCVFMLLFLDACHAPAISPLSPFLSLKTKTLRSSSAKSIKLSSPWTNASLTSPNCFAKEVWGWVNSNSKGVAARRDTRGVVVKAEMFGQLTSGLETAWNKLKGEEVLSKENIVEPMRDIRRALLEADVSLPVVRRFVQSVSDQAVGVGVIRGVRPDQQLVKIVHDELVRLMGGEVSELVFAKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLAILGKQVDVPVYTAGTDVKPSEIAKQGLEEAKKKKIDVVIVDTAGRLQTMMDELKEVKKALNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQQVMRQEDAEELQKKIMSAKFDFNDFLKQTRTVAKMGSVSRVIGMIPGMGKVTPAQIRDAEKNLQNMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMESGSLPTLSNLEEALKAEEKAPPGTARRRKRSESRSVFGDSTPARSSPRGFGSKN 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01849 608 MobiDBLite consensus disorder prediction 566 589 - -
Gma19g01849 608 MobiDBLite consensus disorder prediction 590 608 - -
Gma19g01849 608 Pfam SRP54-type protein, helical bundle domain 128 205 IPR013822 GO:0005525|GO:0006614
Gma19g01849 608 Pfam SRP54-type protein, GTPase domain 223 415 IPR000897 GO:0005525|GO:0006614
Gma19g01849 608 Gene3D - 213 404 IPR027417 -
Gma19g01849 608 Pfam Signal peptide binding domain 446 544 IPR004125 GO:0006614|GO:0008312|GO:0048500
Gma19g01849 608 PANTHER SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54 98 608 IPR022941 GO:0003924|GO:0005525|GO:0006614|GO:0048500
Gma19g01849 608 Hamap Signal recognition particle 54 kDa protein [srp54]. 128 565 IPR022941 GO:0003924|GO:0005525|GO:0006614|GO:0048500
Gma19g01849 608 TIGRFAM ffh: signal recognition particle protein 126 547 IPR004780 GO:0003924|GO:0005525|GO:0006614|GO:0048500
Gma19g01849 608 MobiDBLite consensus disorder prediction 503 530 - -
Gma19g01849 608 MobiDBLite consensus disorder prediction 503 525 - -
Gma19g01849 608 CDD SRP_G 224 413 - -
Gma19g01849 608 Gene3D - 426 550 IPR036891 GO:0006614|GO:0008312|GO:0048500
Gma19g01849 608 SMART SRP54_3 223 415 IPR000897 GO:0005525|GO:0006614
Gma19g01849 608 ProSitePatterns SRP54-type proteins GTP-binding domain signature. 388 401 IPR000897 GO:0005525|GO:0006614
Gma19g01849 608 SMART AAA_5 222 366 IPR003593 -
Gma19g01849 608 PANTHER BNAC02G02820D PROTEIN 98 608 - -
Gma19g01849 608 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 473 IPR027417 -
Gma19g01849 608 Gene3D - 127 425 IPR042101 -
Gma19g01849 608 SUPERFAMILY Signal peptide-binding domain 446 547 IPR036891 GO:0006614|GO:0008312|GO:0048500
Gma19g01849 608 Coils Coil 483 503 - -
Gma19g01849 608 MobiDBLite consensus disorder prediction 564 608 - -
Gma19g01849 608 SMART SRP54_N_2 124 209 IPR013822 GO:0005525|GO:0006614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01849 Gma-Chr19 47731619 47740178 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01849 K03106 - gmx:100782581 986.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01849 19 47731619 47740178 Gma19g01849 19 47731619 47740178 ECH
Gma19g01849 19 47731619 47740178 Gma03g01808 03 44129453 44136327 GST