Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01843 ATGTTTTCTTTTTCTTCAATCACACGGACGCTCCATCTCCTTTCCCACCCACTCAACGTTCCCCCTTGGACCTTCCTCAATCCATTCTTTCTTTCCCCCTCAACCACTCCGCATACCGCCTCCACTCATTCTTCCCAGTGTCAGCGGTGGAGGAGATCTGCATCTCTCACAGCTTGCATGCGGTCATCCACTTCTCGGAAGGCCACATCAATGACAAACGAAGGTGGAGGAGATTTGTCCACAACCACCACAACAACAAATGAGATCCACACCCGCCGACAAGCAACGTCAAGTAACGGTTGGGACAAGGGGGAAAACTCCCAGAGCCGTTGTCTTCCAACTTTTCGTCTTCTCCAATACCTTAAAACTAACAAAACAATAGAGAGAGAACCTCACTCACTCATGGGCTGCGTCTCCTCAAAACACATCAAGAAAGACCTTAAGCAAGAAGAAGTCATTGCCACCAATGACGGCAGTTACGTGAACCACGTCGTATCCCTCACTTCCTCCACCTATGGAGCACTCATGTTGGACAAGGAGAAGGAGCAACACCAACTTCAACTCCCCGTCGAAGAATCCAAAACATCTCCACCTCGGATTCGCGAAGAACCCGAAGTTATCAACGCTTGGGAACTCATGGAGGGTCTCGAAGAGGGAGTGCCCATTTCAAACAACCCCATGAAAATCCCCAAGTCCACACCTTTCCTTCGCGGATTCATCTCCACCGACCCAAAACCCAAAACCAAAACCACCCCTTTCAAATTCCTCAACCAACTCGGGTCCCCCAAGAGTCTCAGGAAGTTCACAGGGAAAGAGAACAAAATTGAAGTGCAAGTTCACCACAATGCCGGTGTAAGACGCTTGGATTACAATTTTAGCCCAAAGGGTATTCTCAAACCCTCCAATTTTTGTTCTCCTCTAAACGGGTCCCCGATTCGTGCTCGAAGGAATAGTTTCGGGAGCGACACCAAGCGGAGGAGTCCTAGTCCTCTGTTCGATCCAGAGCTTCTCGCCTCTTACGAAAAGGAACTCTCCCAAGAGGAAGAACAGATCAAGAGAATGGTGTGGGCCACCCCCAAGACCCGAAGAGTCAGAAAATCTTTGGATTCACAAACTTTCATTAAGACGTTTGAGGAAAAATTGCCCCCCGGAGGGGAAAATTGCGTTGTCATTTACACCACCACTCTAAGGGGAATCAGAAAGACGTTTGAGGAGTGCAACAAGGTAAGGTCCATTATCGAGTCCTATTGCGTGCACGTGCTGGAGCGTGACGTGTCAATGGATTCGAGGTTTAAGGAGGAGTTGCGGAAGCTGATGGGGACCGAGCAAGTTAAGGTTCCGGTTGTGTTCGTGAAGGGAAGGTTTGTTGGGGGTGCTGAGGAAGTTGTGAAGTTGGAAGAGGAGGGGAAATTAGGGGTTCTCTTTGAAGGGATTCCTCCCAAGGCTTTGGGGGAGTGTGAAGGGTGTGGTGGTGTGAGGTTTGTGATGTGCGTGGAGTGTAATGGAAGTTGTAAGGTTTTGGATGAGGATCGCAAGAAGACTCTGAGGTGTGGGCAGTCTACCAAAAAATTCAAGCTCATTCCTCCTGGTTATGCTGAGTCTGTAACACCTTACTGCGTTCTTTTGGTTACATATCAAGGATTTGGTTATGATCATGCTACAAATGACTATAAGGTGTTTCGATACTTATCATTTTTTCCTCGACGATCTGATGTGCCAGTGCCACAGTCATGGAAGAATATGTCTCTCCGCCCCTTGTGGGAGATATATAGTTTGAGAAGTAAGAGGAAACTTGATATCGGTATGCCTGGTAATAGTGATAGTGAAACTGAACTCAGTTTGGTGTCATTTGACTTGACAATTAGGTACAGCCGAAGTTATCAAAACTGGACCGGACTTGGTGTGGTCTCATTAATTGTGAAAGAATCATGGACTAAAACTCTTCAATGTTGGTCCTTACCTTGGGTTGACACTCCTATTGGAGTGAGACTTGAGGAGGGTGATATGCATCCTATCGGAGTGGGGAAGAAGGGCAACATATTCTTCAGAAAGAATGATGGTGAACTAGTCTCGTTTGATTTGAGTAGCCTGAAGATTGAAGAGCTTGGTATCAAAGGAAAGCTTCACTGTTGTCAGACAGCTGGAAACAGTTGGTGCAGAGATGCAGGTTTTAACAAAAGTGAGAAATGGATCTCGCTTCAGGCCGATGGTCAGGTTGTTCTGACTCCTGACGGGGGACAAGAAGCATCTTCACAGATACTGCCTATCAATTTTGATGGACTGGCAAAGTCAATGAAGAAGGGAGACACCAATTTTATTGGTCAATACTTGCTCACAGGAAGTGAAACTACTTCTGTATTGCTAGAGCCTTTTAGGAGTGAGAATAGCAACTCCCAGTAG 2400 0.4692 MFSFSSITRTLHLLSHPLNVPPWTFLNPFFLSPSTTPHTASTHSSQCQRWRRSASLTACMRSSTSRKATSMTNEGGGDLSTTTTTTNEIHTRRQATSSNGWDKGENSQSRCLPTFRLLQYLKTNKTIEREPHSLMGCVSSKHIKKDLKQEEVIATNDGSYVNHVVSLTSSTYGALMLDKEKEQHQLQLPVEESKTSPPRIREEPEVINAWELMEGLEEGVPISNNPMKIPKSTPFLRGFISTDPKPKTKTTPFKFLNQLGSPKSLRKFTGKENKIEVQVHHNAGVRRLDYNFSPKGILKPSNFCSPLNGSPIRARRNSFGSDTKRRSPSPLFDPELLASYEKELSQEEEQIKRMVWATPKTRRVRKSLDSQTFIKTFEEKLPPGGENCVVIYTTTLRGIRKTFEECNKVRSIIESYCVHVLERDVSMDSRFKEELRKLMGTEQVKVPVVFVKGRFVGGAEEVVKLEEEGKLGVLFEGIPPKALGECEGCGGVRFVMCVECNGSCKVLDEDRKKTLRCGQSTKKFKLIPPGYAESVTPYCVLLVTYQGFGYDHATNDYKVFRYLSFFPRRSDVPVPQSWKNMSLRPLWEIYSLRSKRKLDIGMPGNSDSETELSLVSFDLTIRYSRSYQNWTGLGVVSLIVKESWTKTLQCWSLPWVDTPIGVRLEEGDMHPIGVGKKGNIFFRKNDGELVSFDLSSLKIEELGIKGKLHCCQTAGNSWCRDAGFNKSEKWISLQADGQVVLTPDGGQEASSQILPINFDGLAKSMKKGDTNFIGQYLLTGSETTSVLLEPFRSENSNSQ 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01843 799 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 135 519 - -
Gma19g01843 799 Coils Coil 337 357 - -
Gma19g01843 799 MobiDBLite consensus disorder prediction 61 108 - -
Gma19g01843 799 Pfam Glutaredoxin 389 456 IPR002109 -
Gma19g01843 799 ProSiteProfiles Glutaredoxin domain profile. 377 482 - -
Gma19g01843 799 SUPERFAMILY Thioredoxin-like 384 476 IPR036249 -
Gma19g01843 799 Gene3D Glutaredoxin 385 476 - -
Gma19g01843 799 PANTHER EMB|CAB85507.1 135 519 - -
Gma19g01843 799 CDD GRX_GRX_like 389 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01843 Gma-Chr19 47685195 47692771 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01843 K17479 - gmx:121174128 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01843 19 47685195 47692771 Gma19g01843 19 47685195 47692771 ECH
Gma19g01843 19 47685195 47692771 Gma03g01804 03 44094158 44097943 GST