Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01828 ATGTATTCCATCTCATTCTGTGTATCTTCCACAACCCCACTATATAACAGACCCTCCATATTCAAAATGGTGCCTTTCACTCCCAGCAACAAATTGCAACAATCAACAAGTAGTCCAACCCGAATAAACATGATGGGAAAATGTAGTAAGTCCCTTATGGCGTTCCCAATCCTCCTCCTACGCACCCTATGCTTCCTTTTGTTCTCACAACCCCTCCTTTCTCAGGAGAACAATTTTGTTCGTCAGCCAGCTGCTCAACTCATCATCACTCCCCACCATCGCTCCCATTCAGACCCCCAACAGGTACACATTTCTTTGGTGGGCCAAGAGAAGATGAGGGTGTCGTGGATAACCGAAGACAAGCACGCAGAATCTGTGGTGGAGTACGGAACAAAGGCAGGGGAATATAGCGCAAAAGCAACGGGGGTGTACACCTCGTACCAATATTTTTTCTATAACTCCGGCAAGATTCACAACGTTGTAATTGGGCCATTGCAGCCTAGTTCGACTTACTTCTACAGGTGCGGAGGGTCAGGTCCTGAGTTTTCCTTCAAGACACCACCGCCCAGGTTTCCCATTGAATTTGTCATCGTTGGTGACTTGGGACAAACAGAATGGACTGCATCAACCTTAAAACACATTGATAGCAGCGACTATGATGTGTTCTTGTTACCAGGAGACCTATCCTATGCCGATTCCCAACAACCTTTGTGGGACTCTTTTGGTCGTTTGGTGGAGCCATATGCTAGTAAAAGGCCATGGATGGTTACCGAAGGCAACCACGAGATTGAGATTTTCCCTATTATCTACCCACAAGGCTTCCAAGCCTACAACGCTCGCTGGCCCATGCCCTTCCAACAAAGTGGTTCCACCTCAAACCTCTATTACTCCTTCGAGGTTGCCGGCACCCACGTCATCATGCTAGGTTCCTACACTGATTTTGACTCCCAATCACTTCAGTACACGTGGCTTCAATCTGACCTCGCCAACATTGATAGGGTCAAGACACCTTGGGTGATTGTGTTGCTGCATGCACCTTGGTATAATACTAATGAGGCACACCAAGGTGAAGGTGAATCCATGAGACAAGCCATGGAGGAGTTGCTTTATGAGGCACGCGTTGACTTGGTTTTTGCTGGCCATGTTCATGCATATGAACGCTTCACTCGAATTTACGACAATAAGGCTGATTCGTGTGGACCAATGTACGTGACAATTGGTGACGGAGGAAACAGGGAAGGTCTTGCGTTAATGTTTAAGAACCCTTCAAGCCCGCTCTCATTGTATCGAGAGCCAAGCTTTGGACATGGAAGGTTGCGAATACTAAATGAAACACATGCACATTGGTCATGGCACCGAAACAATGATGCTGATGCGGTTGTAGCTGATGGTGTTTGGATAGAGAGTTTAAGCAGCTCGAAAGCATGCTCGAAGACACCATACCAACAATATGCTGCTAACGAAGAGCTATAA 1473 0.4691 MYSISFCVSSTTPLYNRPSIFKMVPFTPSNKLQQSTSSPTRINMMGKCSKSLMAFPILLLRTLCFLLFSQPLLSQENNFVRQPAAQLIITPHHRSHSDPQQVHISLVGQEKMRVSWITEDKHAESVVEYGTKAGEYSAKATGVYTSYQYFFYNSGKIHNVVIGPLQPSSTYFYRCGGSGPEFSFKTPPPRFPIEFVIVGDLGQTEWTASTLKHIDSSDYDVFLLPGDLSYADSQQPLWDSFGRLVEPYASKRPWMVTEGNHEIEIFPIIYPQGFQAYNARWPMPFQQSGSTSNLYYSFEVAGTHVIMLGSYTDFDSQSLQYTWLQSDLANIDRVKTPWVIVLLHAPWYNTNEAHQGEGESMRQAMEELLYEARVDLVFAGHVHAYERFTRIYDNKADSCGPMYVTIGDGGNREGLALMFKNPSSPLSLYREPSFGHGRLRILNETHAHWSWHRNNDADAVVADGVWIESLSSSKACSKTPYQQYAANEEL 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01828 490 CDD MPP_PAPs 189 469 IPR041792 -
Gma19g01828 490 SUPERFAMILY Metallo-dependent phosphatases 192 456 IPR029052 -
Gma19g01828 490 Pfam Purple acid Phosphatase, N-terminal domain 99 186 IPR015914 GO:0003993|GO:0046872
Gma19g01828 490 Pfam Iron/zinc purple acid phosphatase-like protein C 400 457 IPR025733 -
Gma19g01828 490 SUPERFAMILY Purple acid phosphatase, N-terminal domain 89 188 IPR008963 GO:0003993|GO:0046872
Gma19g01828 490 Pfam Calcineurin-like phosphoesterase 195 385 IPR004843 GO:0016787
Gma19g01828 490 Gene3D - 98 189 - -
Gma19g01828 490 Gene3D - 190 477 IPR029052 -
Gma19g01828 490 PANTHER PURPLE ACID PHOSPHATASE 32 481 - -
Gma19g01828 490 PANTHER ACID PHOSPHATASE RELATED 32 481 IPR039331 GO:0003993
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01828 Gma-Chr19 47557478 47560606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01828 99 459 Miscellaneous Gene Families AT2G03450 27.169 4.71e-28 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01828 K22390 - gmx:100817498 1008.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01828 19 47557478 47560606 Gma19g01828 19 47557478 47560606 ECH
Gma19g01828 19 47557478 47560606 Gma03g01785 03 43965032 43968926 GST