Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01818 ATGCCAATGGCATCGGCACTGGCGGGGGATGATTTGGCCGTATCAACTAGCAGTCGCCGGAGCTGGACAACGGCGAGTTTCAGGGATGCATGGACGGCAGCGCCGGACGTGTTCAACGTGAGCGGCCGCCACGTGTATGAGGACGACGAGGAAGAGCTCAAATGGGCTGCCATAGACCGCTTGCCAACTTTTGAACGCATGAGAAAAGGCGTCCTCAAGCACGTGCTCGACGATGGACATGTGATGCTCGATGAAGTCGATGTTTCCAACCTTTGCTTACATGACAAGAAGCTCTTAATTGACAGCATACTTAAGATTGTCGAGGAAGACAATGAAAAATTCCTACGCAGACTTAGAAATAGAGTTGATAGAGTAGGGATTGAAATTCCGAAGATTGAAGTTCGGTGCGAGAATTTATCTGTGGAGGGTGATGTGCATGTTGGGAGTAGAGCACTTCCTACCCTGCTTAATGCTACTCTCAATGCTTTTGAGAGTGTTCTGGGAATGTTTCACCTTGCACCATCCAAGAAGAGGGAAATCCAGATTCTTAAAGATGTTAGTGGAATCGTTAAACCCTCAAGGATGACTCTCCTTTTGGGTCCTCCATCTTCGGGGAAAACAACATTGCTTTTGGCGCTTGCAGGGAAACTTGATCGTGATTTAAGGGTGTCTGGGAGGATCACTTACTGTGGCCATGAGCTAAATGAATTTGTTCCACAAAAAACCTGTGCCTATATCAGTCAACACGACATTCACTATGGAGAAACGACAGTGAGAGAGACATTAGATTTTTCAGGACGTTGTCTAGGTGTTGGTACTAGGTATGAAGCATTAGTggaactgtcaagaagggagagagaagcaggaataaagccagaccctgagattgatgcattcatgaaggctatagcCTTGTCAGGTCAAAAAACCAATTTGGTAACAGATTATGTACTCAAGatccttggattggatatttgtgccgacattgtggttggagatgagatgagaagaggcatctctggtggacaGAAGAAGCGAGTAACAACAGGGGAGATGCTGGTAGGACCGGCAAAGGCACTATTTATGGATGAAATATCAACAGGATTAGACAGTTCCACCACCTTTCAGATATGCAAGTTCATGAGGCAAATGGTTCATGTAATGGACGTAACCATGGTGATTTCGCTTCTACAACCCGCACCAGAGACATTTGAACTCTTTGATGACATTATCCTACTTTCAGAAGGTCAAATTGTATATCAAGGTCCACGTGAGAATGGGTTAGAGTTCTTTGAACACATGGGTTTCAAGTGTCCTGAGAGAAAAGGAGTTGCTGATTTTTTACAAGAAGTAACATCCAAGAAAGACCAGCAACAATATTGGTCTAGAAAAGATGAACCTTACAGATATGTTTCCGTTTCAGAATTTGTGCAAGCCTTTAGTTCATTTGACATAGGAGAGCAACTTGCCACTGAGCTTGGAGTTCCCTATGATAAGAGACAAGCCCACCCAGCTGCCTTAGTGAAAGAAAAGTATGGTATAACAAACTGGGAACTATTTAAGGCATGTTTTTCAAGAGAATGGCTACTCATGAAGCGCAGTTCTTTTGTTTATATATTCAAGACAACACAGATAACAATCATGTCTATTATTACATTTACTGTGTTCCTTAGAACAGAAATGTCAGTGGGAACTGTTGAAGATGGACAAAAATTCTTTGGAGCATTATTCTTTTCGCTAATAAACGTGATGTTTAATGGGATGGCAGAACTATCTATGACTGTTTTTAGGCTTCCTGTCTTTTACAAACAAAGGGATTTCAGGTTCTACCCtgcatgggcatttggtttgcctatatggcttctcaggatccctctgtccattatggaatcagggatatggattgcccttacatattacaccatagggtttgctccttctgctagcagATTTATCCGGCAATTCTTGGCATTATTTGCCATTCATCAGATGGCTCTCTCTTTATTTCGGTTCCTTGCTGCAGCTGGTAGAACACTAGTTGTTGCTAATACACTGGGTACCTTGTCCCTGCAATTGGTATTTGTGCTAGGAGGTTTTGTTATTGCCAAAGATGACATTGAGCCATGGATGATGTGGGGCTATTATCTATCTCCTATGATGTATGGTCAGAATGCCATAGTAATGAATGAATTCTTAGATAAAAGATGGAGTAAACCAAATACAGACCCTAGAATTAATGCACCTACAGTTGGAAAGGTGCTTCTCAAATCTAGAGGCTTCTATACAGAAGAGTATTGGTTTTGGATCTGCATTGGAGCCTTGCTTGGGTTTTCTCTTCTCTTCAATCTCTTATTCATTGTTGCTTTAACTTATTTGAATCCTTTGGGTTATTCAAAAGCAGTCATTGCCGATGAAGGTGACAAAAAGAATAACAAGTCATCCTCTAGCCAACATATTCTTGAAGGAACAGACATGGCAGTGAAAGAATCTTCAGAAATGGCTAGTTCTTTGAACCAAGAACCaagaaggggaatggttctaccatttcaacctctttcacttgcattcaatcatattagctactatgtagatatgccTGCAgaaatgaggagtcgaggaatcaataaagatcgacttcaactactacaagatgttagtggtgcttttagaccaggaattttgacagcacttgtgggtgttagtggtgctggaaagacaacccttatggatgtATTAGCTGGAAGAAAAACAGGTGGATACATTGAAGGAAGTATTAGCATCTCAGGTTACCCAAAGAACCAAGCAACATTTTCTCGTATCAGCGGTTATTGTGAACAAAATGACATCCATTCTCCACATGTTACTGTATATGAATCACTATTATTTTCAGCATGGCTTCGCCTTCCTTCAGATGTAAATGCACAAAAGCGAAAGATGTTTGTTGAAGAAGTTATGGAGTTGGTTGAGCTTAACCAAATCAGAGATGCACTAGTGGGTCTTCCAGGAGTGGATGGTCTATCAACAGAACAAAGGAAAAGGCTTACTATTGCGGTAGAATTGGTTGCCAACCCTTCAATTATCTTCATGGATGAACCAACATCTGGCCTTGATGCTAGAGCTGCTGCTATTGTCATGCGAACTGTGAGAAATACAGTAGACACAGGGAGAACCGTTGTGTGCACAATTCATCAACCAAGCATAGACATTTTTGAAGCTTTTGATGAGATTTTGTTGATGAAAAGAGGAGGACAAGTTATCTATGCTGGACCTCTTGGTCGTCACTCACACAAGCTAATAGAATATTTTGAAggtatcccaggggttccaaaaatcaaggatggttataatcctgcctcatggatgcttgatatcagctctacaacaatggaggctaatcttgaggtAGATTTTGCAGAGATTTATGCTAAGTCTACCCTCTACCGGAGGAATCAAGAACTTATTGAGGAGCTCAGTACCCCAGTACCAGATTCCAAGGACTTGCACTTCCCAACCAAATATTCCCAATCGTTTTTTGTTCAGTGCAAAGCTAATTTCTGGAAACAATATTGGTCCTACTGGAGATATCCTCAGTATAATGCTGTCCGATTCTTTATGACAATTGTTGTGGGAGTAATGTTTGGTGTGATTTTCTGGAATAAAGCCAAAAAGACCCATAAACAACAAGATTTGATGAATCTTTTGGGAGGCATGTATGCTGCTATGCTTTTTCTTGGAGCCATGAATGCTTCATCAGTGCAACCAGTTGTTGCCATTGAAAGAACTATCTTCTATCGTGAAAGAGCAGCAGGGATGTACTCTGCATTGCCCTATGCATTTGGCCAGGTGGCAATAGAGGCAATTTATAATGCAATTCAAACAGCAGTTTACTCTCTTATCCTTTACTCAATGATTGGGTTTGATTGGAAGGCAACAAGCTTCTTTTGGTTCTACTACTATATATTAATGTGCTTTATGTACTTCACGTTGTATGGAATGATGATTGTAGCACTAACACCGGGTCACCAGGTTGCTGCAATTTGTATGTCCTTCTTCTTGAGTTTCTGGAACTTGTTCTCTGGCTTTATCATTCCTAGGACGCAAATTCCTGTGTGGTGGAGATGGTATTATTGGGCTTCTCCTGTTTCTTGGACACTATATGGCCTTATTACCTCACAACTGGGTGACAAAAATGCAGAATTGGAGATACCAGGTGCTGGAAGCATGGGATTGAAGGAATTCCTTAAACAAAACTTGGGTTTTGACTATGATTTCCTTCCCGTTGTTGCTGCTGCTCATGTAGGCTGGGTTATCCTCTTCATGTTCGTTTTTGCCTATGGCATCAAATTCTTGAATTTCCAAAGGAGATAG 4368 0.3597 MPMASALAGDDLAVSTSSRRSWTTASFRDAWTAAPDVFNVSGRHVYEDDEEELKWAAIDRLPTFERMRKGVLKHVLDDGHVMLDEVDVSNLCLHDKKLLIDSILKIVEEDNEKFLRRLRNRVDRVGIEIPKIEVRCENLSVEGDVHVGSRALPTLLNATLNAFESVLGMFHLAPSKKREIQILKDVSGIVKPSRMTLLLGPPSSGKTTLLLALAGKLDRDLRVSGRITYCGHELNEFVPQKTCAYISQHDIHYGETTVRETLDFSGRCLGVGTRYEALVELSRREREAGIKPDPEIDAFMKAIALSGQKTNLVTDYVLKILGLDICADIVVGDEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQICKFMRQMVHVMDVTMVISLLQPAPETFELFDDIILLSEGQIVYQGPRENGLEFFEHMGFKCPERKGVADFLQEVTSKKDQQQYWSRKDEPYRYVSVSEFVQAFSSFDIGEQLATELGVPYDKRQAHPAALVKEKYGITNWELFKACFSREWLLMKRSSFVYIFKTTQITIMSIITFTVFLRTEMSVGTVEDGQKFFGALFFSLINVMFNGMAELSMTVFRLPVFYKQRDFRFYPAWAFGLPIWLLRIPLSIMESGIWIALTYYTIGFAPSASRFIRQFLALFAIHQMALSLFRFLAAAGRTLVVANTLGTLSLQLVFVLGGFVIAKDDIEPWMMWGYYLSPMMYGQNAIVMNEFLDKRWSKPNTDPRINAPTVGKVLLKSRGFYTEEYWFWICIGALLGFSLLFNLLFIVALTYLNPLGYSKAVIADEGDKKNNKSSSSQHILEGTDMAVKESSEMASSLNQEPRRGMVLPFQPLSLAFNHISYYVDMPAEMRSRGINKDRLQLLQDVSGAFRPGILTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKNQATFSRISGYCEQNDIHSPHVTVYESLLFSAWLRLPSDVNAQKRKMFVEEVMELVELNQIRDALVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDEILLMKRGGQVIYAGPLGRHSHKLIEYFEGIPGVPKIKDGYNPASWMLDISSTTMEANLEVDFAEIYAKSTLYRRNQELIEELSTPVPDSKDLHFPTKYSQSFFVQCKANFWKQYWSYWRYPQYNAVRFFMTIVVGVMFGVIFWNKAKKTHKQQDLMNLLGGMYAAMLFLGAMNASSVQPVVAIERTIFYRERAAGMYSALPYAFGQVAIEAIYNAIQTAVYSLILYSMIGFDWKATSFFWFYYYILMCFMYFTLYGMMIVALTPGHQVAAICMSFFLSFWNLFSGFIIPRTQIPVWWRWYYWASPVSWTLYGLITSQLGDKNAELEIPGAGSMGLKEFLKQNLGFDYDFLPVVAAAHVGWVILFMFVFAYGIKFLNFQRR 1455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01818 1455 Pfam ABC-transporter N-terminal 108 158 IPR029481 -
Gma19g01818 1455 Pfam Plant PDR ABC transporter associated 736 802 IPR013581 -
Gma19g01818 1455 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 22 1455 - -
Gma19g01818 1455 Gene3D - 868 1100 IPR027417 -
Gma19g01818 1455 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 440 IPR027417 -
Gma19g01818 1455 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 877 1091 IPR027417 -
Gma19g01818 1455 Pfam ABC-2 type transporter 398 471 IPR043926 GO:0140359
Gma19g01818 1455 Pfam ABC-2 type transporter 1063 1133 IPR043926 GO:0140359
Gma19g01818 1455 SMART AAA_5 891 1083 IPR003593 -
Gma19g01818 1455 SMART AAA_5 192 417 IPR003593 -
Gma19g01818 1455 Pfam ABC transporter 882 1034 IPR003439 GO:0005524
Gma19g01818 1455 PANTHER ATP-BINDING CASSETTE TRANSPORTER 22 1455 - -
Gma19g01818 1455 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 167 440 IPR003439 GO:0005524
Gma19g01818 1455 CDD ABCG_PDR_domain2 851 1089 IPR034003 -
Gma19g01818 1455 Pfam ABC-2 type transporter 519 731 IPR013525 GO:0016020|GO:0140359
Gma19g01818 1455 Pfam ABC-2 type transporter 1180 1392 IPR013525 GO:0016020|GO:0140359
Gma19g01818 1455 CDD ABCG_PDR_domain1 172 422 IPR034001 -
Gma19g01818 1455 Pfam ABC transporter 183 365 IPR003439 GO:0005524
Gma19g01818 1455 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 854 1106 IPR003439 GO:0005524
Gma19g01818 1455 Gene3D - 169 474 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01818 Gma-Chr19 47478813 47487305 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01818 K08711 - gmx:100786482 2864.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01818 19 47478813 47487305 Gma19g01818 19 47478813 47487305 ECH
Gma19g01818 19 47478813 47487305 Gma03g01772 03 43826608 43835932 GST