Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01810 ATGTTCAACATGTTGCAAACTCATCACCTCCAGTTTCTAGCGATTCTCTTTCTATATACGCTGACATGCTCTGAAACCGCAGCCACTTCCATCCCACAAGAGCTTCACATAGGCTTCTCTGTGACGCCAGAGTCTTGGACGACGCCGTTTCAAGCAGTTCTGAGCGATCATAGTGGCAACTTCTCTCTAGGCTTCCTCCGCGTGAACCAAAACCAGCTGGCACTGGCGGTCCTCCACGTGGCATCCTCGGAGCCATTCTGGGTGGCCAACCCATCCCACGCGCCATCATGGTCCGACAACACGCGCCTCTTCTTCAACGGCAGCCTCGTCCTGTCCGACCCCGAAACGCTCGTTTTGTGGTCAACCGCCACAAACGGAGACCGCGTGGTGCTCCTCAACAGCTCCAATTTACAAGTTCACCACAATGGCATTCCCCTATGGGAGAGTTTTCACTTTCCCAAAAATACTCTCGTCCAGGACCAGAATTTCACCTCCAACATGACTCTTTTGTCCTCCAACGGCATTTATTCCATGAGGTTAGGCAACGATTTCATGGGGTTATACGAAAACCATGTCCAATTATATTGGAAACGCACGCCACTGGGAGCAAAAGCGGAAGTAAAGGAAGGGCAGGGACCGATTTACGCCCGAGTCAACCCGGAGGGTTACCTCGGGATGTATCAGACAACCGACGAGAAGCCCACGGATGTTCAAAAGTTCAACACGTTCCAACAAACGTCGTCGTTTTTGTTCGTGCGGTTGGAACCGGACGGGAATCTGAAGGGCTACTACTGGGACGGTTCCACGTGGCAGCTCAACTACCAGGCTATTACTGAAGCCTGCGACCTCCCCCGCTCCTGCGGTTCGTACGGTTTGTGCACTCCGGGAGGGTCTGGGTGCTCCTGTTTAGAAAACCGAACCCGGTTCGAACCGGATGGGTGTTTTAAAGATGTTGGTGGAGAGTCGTCTGGGGACTTGTGTAGTAGTGAAGGGATTGGTGGAAGTAAAAGCAGTTACTGGGTGCTGAGAAGAACGGGAGTGGAAGCACCGCATAAGGAGCTAGTAAGGCACCTAACGACGTCGTCTCGGGCGGATTGTGAGGGATTGTGCCAGAACAACTGTAGCTGCTGGGGGGCGCTGTATAGCAACGCAACCGGGTTTTGTTATATGTTGGACTATCCGATCCAGACAATGGTGGGTACTGGGGATGGGTCAAAAGTGGGTTACTTCAAGGTTAAAAAAGAGGAACGAGGAAAGAACCGGGTTTGGATACGGGTTGGGGTTGTGGTTACGGTTTTGGTTGGGGTTGGGGTTATTATTGTTGGAACCGGATTTTGCGTGACGAGATGGAGAAAGAGGAGAGGGGTGAAGGAAGAGGAATGGGGTTCGCCCGGCCCGTATAAGAATCTTGGATCCGCAAGTTTTAGATTCATAGAAATGAGCAATGCCCATGACGCAAGGGGTGACGCATGTGCTCAAAGTTGA 1485 0.5205 MFNMLQTHHLQFLAILFLYTLTCSETAATSIPQELHIGFSVTPESWTTPFQAVLSDHSGNFSLGFLRVNQNQLALAVLHVASSEPFWVANPSHAPSWSDNTRLFFNGSLVLSDPETLVLWSTATNGDRVVLLNSSNLQVHHNGIPLWESFHFPKNTLVQDQNFTSNMTLLSSNGIYSMRLGNDFMGLYENHVQLYWKRTPLGAKAEVKEGQGPIYARVNPEGYLGMYQTTDEKPTDVQKFNTFQQTSSFLFVRLEPDGNLKGYYWDGSTWQLNYQAITEACDLPRSCGSYGLCTPGGSGCSCLENRTRFEPDGCFKDVGGESSGDLCSSEGIGGSKSSYWVLRRTGVEAPHKELVRHLTTSSRADCEGLCQNNCSCWGALYSNATGFCYMLDYPIQTMVGTGDGSKVGYFKVKKEERGKNRVWIRVGVVVTVLVGVGVIIVGTGFCVTRWRKRRGVKEEEWGSPGPYKNLGSASFRFIEMSNAHDARGDACAQS 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01810 494 ProSiteProfiles PAN/Apple domain profile. 327 414 IPR003609 -
Gma19g01810 494 PIRSF SLG 1 426 IPR035446 -
Gma19g01810 494 PANTHER - 43 472 - -
Gma19g01810 494 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 268 IPR036426 -
Gma19g01810 494 Pfam S-locus glycoprotein domain 241 304 IPR000858 GO:0048544
Gma19g01810 494 PANTHER OS11G0149900 PROTEIN 43 472 - -
Gma19g01810 494 Gene3D - 48 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01810 Gma-Chr19 47338483 47340569 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01810 - - gmx:100812159 1005.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01810 19 47338483 47340569 Gma19g01810 19 47338483 47340569 ECH
Gma19g01810 19 47338483 47340569 Gma03g01761 03 43694937 43697099 GST