Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01769 ATGGCTTCCGAAGCAGCACCACACTTCGTCTTGTTTCCACTGATGGCTCAAGGCCACATGATCCCCATGATGGACATAGCAAAAATATTGGTGCACCGCAACGTTATTGTGACTGTAGTCACAACTCCACATAACGCAGCACGTTTCACATCAATCATTGATCGTTATATTGAGTCAGGGTTTCCTATAAGATTGGTTCAACTTCAATTCCCATGTGAAGAAGCTGGAGTACCAGACGGATGCGAGAATCTCGATATGATACCTTCACTTGCCACGGCCACAAGTTTCTTCAAAGCAACACAACTTCTACAACAACCAGCGGAAAAACTGTTTGAAGAGTTAACACCACCAAGCTGCATAGTCTCTGATATGTGTTTGCCATATACAACCCAAATCGCCAAAAAGTTCAATGTTCCCAGGATTTCTTTTGTTGGAGTAAGTTGCTTTTGTCTTCTGTGTATGCATAATATAAACATCCATAATGTTAGGGAGAGCGTAACATCTGAGTCAGAGTACTTTGTTCTGCCCGGTATCCCTGAAAAAATTGAGATGACCCTCGCACAGACTGGACAACCTATGAATGAAAGCTGGAAACAGATTAATGAAGAAATTAGGGAAGCTGAAATGTCTAGTTATGGAGTAGTCATGAATTCTTTTGAAGAGTTGGAGCCAGCATATGCAACGGGCTACAAGAAGATCAGAGGCGATAAATTGTGGTGTATAGGCCCTGTGTCTCTTATTAACAAGGATCATTTAGATAAGGCTCAAAGAGGTACGGCCTCAATAGATGTGTCGCAACACATAAAATGGCTTGATTGTCAGAAGCCAGGAACTGTAATCTATGCATGTCTTGGAAGCCTATGCAATTTAACAACACCCCAGTTGAAAGAGCTTGGTTTAGCCTTGGAAGCATCAAAAAGACCCTTCATTTGGGTTATCAGGGAAGGAGGTCATTCCGAAGAATTAGAAAAGTGGATTAAGGAATATGGATTTGAGGAAAGGACCAATGCTAGAAGCCTTCTCATTCGGGGATGGGCGCCTCAAATATTAATATTATCTCACCCTGCTATTGGAGGGTTTATAACACACTGTGGTTGGAACTCTACCTTAGAAGCAATATGTGCCGGGGTGCCAATGCTTACGTGGCCACTATTTGCGGATCAGTTTTTGAATGAAAGCCTAGTGGTGCATGTACTAAAAGTTGGAGTGAAGGTTGGGGTGGAAATTCCGCTTACATGGGGTAAGGAAGTGGAAATTGGTGTGCAAGTGAAGAAGAAAGATGTTGAAAGGGCAATAGCAAAGTTGATGGATGAGACAAGCGAAAGTGAAAAAAGAAGAAAAAGGGTGAGAGAGCTTGCTGAGATGGCTAACAGAGCCGTAGAGAAAGGGGGATCCTCTTATTCTAATGTGACCTTGCTTATCCAGGATATCATGCAGAAAAACAAGAGAGATGTGTGA 1458 0.4252 MASEAAPHFVLFPLMAQGHMIPMMDIAKILVHRNVIVTVVTTPHNAARFTSIIDRYIESGFPIRLVQLQFPCEEAGVPDGCENLDMIPSLATATSFFKATQLLQQPAEKLFEELTPPSCIVSDMCLPYTTQIAKKFNVPRISFVGVSCFCLLCMHNINIHNVRESVTSESEYFVLPGIPEKIEMTLAQTGQPMNESWKQINEEIREAEMSSYGVVMNSFEELEPAYATGYKKIRGDKLWCIGPVSLINKDHLDKAQRGTASIDVSQHIKWLDCQKPGTVIYACLGSLCNLTTPQLKELGLALEASKRPFIWVIREGGHSEELEKWIKEYGFEERTNARSLLIRGWAPQILILSHPAIGGFITHCGWNSTLEAICAGVPMLTWPLFADQFLNESLVVHVLKVGVKVGVEIPLTWGKEVEIGVQVKKKDVERAIAKLMDETSESEKRRKRVRELAEMANRAVEKGGSSYSNVTLLIQDIMQKNKRDV 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01769 485 Coils Coil 425 445 - -
Gma19g01769 485 Gene3D Glycogen Phosphorylase B; 268 461 - -
Gma19g01769 485 CDD GT1_Gtf-like 7 456 IPR002213 GO:0008194
Gma19g01769 485 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 279 398 IPR002213 GO:0008194
Gma19g01769 485 Gene3D Glycogen Phosphorylase B; 4 267 - -
Gma19g01769 485 PANTHER GLYCOSYLTRANSFERASE 6 481 - -
Gma19g01769 485 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 480 - -
Gma19g01769 485 ProSitePatterns UDP-glycosyltransferases signature. 345 388 IPR035595 -
Gma19g01769 485 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 6 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01769 Gma-Chr19 46994341 46996020 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01769 8 480 Glycosyltransferase AT2G36760 56.904 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01769 K13496 - gmx:100527132 963.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01769 19 46994341 46996020 Gma19g01769 19 46994341 46996020 ECH