Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01707 ATGGCAAAGCTATTCAATTTCCTCCCTCTCCTCTTCCTCAACATCTTCATTCAAACAATTTCAGCCCAAGTAGCACCAGCACCAGCGGGCCCCACCAACATCACCCAAGTTCTTGAGAAAGCAGGCCAATTCACAACCTTCATCAAACTTCTCAAGGCCTCACAAATAGCTGATAGAATCAATTCGCAGCTCAACAACTCAAACCAAGGCCTAACCGTATTTGCACCCACTGATAATGCATTCTCAAGCCTCAAAGCAGGGACACTAAACTCCATAAACTCACAAGACCAAATGCAGTTGATACAGTTCCACATTCTCCCCACTCTCTACACCATCTCACAGTTCCAAACCGCAAGCAACCCTTTGCACACGCAAGCTGGGAACAGTGATGATGGAGAGTACCCTTTAAATGTCACCACCTCAGGGAACCAAGTGAATGTAACAACTGGGGTGGTTGATACTACAGTGTCCAATACTATCTACAGTGATAACCAGCTTGCAGTGTATCAGGTAGATAAGGTACTTCTTCCAATGAAGCTTTTCGGCGCAACGGCACCGGCTGCTTCACCGGCAGAGGCTCCGGCACCGACCAAGCCGGAGAAAAATGTCCGGGCTGGGGCTGCTGATTCTCCTTCAGGGTCGTCGGACACGTCCGCTGATGCTTCGAGTGCAGTGAGTTTGAAAAGGCACACAGTTGAAGCGAGTTTGGGTTGA 714 0.4888 MAKLFNFLPLLFLNIFIQTISAQVAPAPAGPTNITQVLEKAGQFTTFIKLLKASQIADRINSQLNNSNQGLTVFAPTDNAFSSLKAGTLNSINSQDQMQLIQFHILPTLYTISQFQTASNPLHTQAGNSDDGEYPLNVTTSGNQVNVTTGVVDTTVSNTIYSDNQLAVYQVDKVLLPMKLFGATAPAASPAEAPAPTKPEKNVRAGAADSPSGSSDTSADASSAVSLKRHTVEASLG 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01707 237 ProSiteProfiles FAS1/BIgH3 domain profile. 31 175 IPR000782 -
Gma19g01707 237 Gene3D FAS1 domain 16 177 IPR036378 -
Gma19g01707 237 MobiDBLite consensus disorder prediction 187 237 - -
Gma19g01707 237 Pfam Fasciclin domain 43 177 IPR000782 -
Gma19g01707 237 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 228 IPR045003 -
Gma19g01707 237 SUPERFAMILY FAS1 domain 30 177 IPR036378 -
Gma19g01707 237 MobiDBLite consensus disorder prediction 208 229 - -
Gma19g01707 237 SMART fasc_3 72 178 IPR000782 -
Gma19g01707 237 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 3 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01707 Gma-Chr19 46354938 46355772 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01707 - - gmx:100805219 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01707 19 46354938 46355772 Gma19g01707 19 46354938 46355772 ECH
Gma19g01707 19 46354938 46355772 Gma03g01661 03 42693156 42693986 GST