Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01655 ATGGATCATAACCACCATCATCGTCATCACAATCACAATCATGCTCTTCACACCACCCCTCTCTCCGAGCCCACCACCCCCACCACCCCTCGCCCCAccctcttcctctccacctccggcaaggccctcctcctctccaactccaacaagCGCCTCGACACCCCCAGGAAGAAATATGTCAAGCAGGTCACCGGCCGCCACAACGACACCGAGCTCCACCTCGCCTCGCAGCGCGGCGACGTGGACTCTGTCCGCCACGTCCTCGCCGAGATCGACTCCATCATGATGGGGAGCTTGGAGTTCGATGCGGAGTTGGCGGACATCAGGTCCGCCATCTTCAACGAGGTGAATGATCTGGGAGAAACCGCCCTCTTCACCGCCGCGGAAAAGGGCCACCTCGACGTCGTCCGGGAGCTCCTCCCTTACACCACCGATGATGCGCTTTCCTCCAAAAACCGCTCCGGCTTTGACACCTTGCACATCGCCGCTAGCAATGGTCATCTTGCCATTGTGCAGGCGCTACTAGACCATGACCCCGGTTTGATTAAGACGTTTGCGCAGTCAAATGCAACTCCTCTAATCTCTGCAGCTACACGAGGGCATGCAGATGTTGTTGAAGAGTTGTTGTCTCGAGATCCTACTCAGTTGGAGATGACTAGGTCCAACGGAAAAAATGCTCTCCATTTAGCTGCACGCCAGGGACATGTAAGTGTTGTAAAGATACTGCTGCGGAAGGATCCACAACTTGCTCGAAGGACTGATAAGAAAGGACAAACTGCACTACACATGGCTGTCAAAGGCGTTAGTTGTGAAGTGGTGAAGCTGATTCTTGCTGCGGATACAGCCATTGTCATGCTTCCTGACAAGTTTGGTAATACTGCATTGCATGTAGCCACAAGGAAAAAGAGGACAGAGATAGTGCATGAGCTGTTGCTTCTACCTGACACCAATGTGAATACATTGACAAGAGATCACAAGACAGCTCTTGACCTTGCGGAGGGGCTTCCGATATCTGAGGAAATTCTTGAGATCAAAGAGTGTCTGATTCGTTATGGTGCAGTTAAAGCCAATGATCTCAACCAACCAAGGGACGAGCTAAGGAAAACCATGACACAAATCAAGAAAGATGTGTATTTTCAGCTGGAACAGGCTCGAAAAACAAACAAGAACGTGAGTGGGATTGCTAATGAGCTACGCAAGCTGCACAGAGCTGGAATCAACAATGCCGCAAACTCAGTAACGGTGGTTGCTGTGTTATTTGCAGCGGTTGCATTTGCAGCAATGTTCACAGTTCCTGGTGGGGACAATGATCATGGGGTGGCAGTGATGGTACAAACTGCGTCTTTCAAGGCCTTCTTCATATCCAATGCCATTGCACTCTTCACATCATTAAGTGTGGTGGTGGTTCAAATCACAATTGTTAGAGGGGAGATAAAGGCTGAAAGAAGGGTTGTGGAGGTGATCAACAAGATGATGTGGTTAGCCTCTGTCTGCACCTCTGTTTCGTTCATTTCAGCATCTTATATAGTAGTTGGTCGACGCAGCCAGTGGGCTGCAATACTTGTTACCATTGTAGGGGCCATTGTAATGGGTGGTGTTCTTGGTACCATGACATACTATGTGGTGAAATCCAAACGCTCCCGAAGGATGAGGAGGAAGAAAGGGAAGTTCTCTAAGACAGGAACACACTCGTGGCGCCTTTCGATTTCTAGATATCTTAGGAAGAGGAGCACAGAAAACCACCCCTCTCTCTCTAAGCACAGCCTAAGATGTCTTACTCATGATTTCCTGCTATCTCAAATTGCTGCTACAAGCAAGAAGAAGTGGAGTCTGATTGAACTCTGA 1845 0.4802 MDHNHHHRHHNHNHALHTTPLSEPTTPTTPRPTLFLSTSGKALLLSNSNKRLDTPRKKYVKQVTGRHNDTELHLASQRGDVDSVRHVLAEIDSIMMGSLEFDAELADIRSAIFNEVNDLGETALFTAAEKGHLDVVRELLPYTTDDALSSKNRSGFDTLHIAASNGHLAIVQALLDHDPGLIKTFAQSNATPLISAATRGHADVVEELLSRDPTQLEMTRSNGKNALHLAARQGHVSVVKILLRKDPQLARRTDKKGQTALHMAVKGVSCEVVKLILAADTAIVMLPDKFGNTALHVATRKKRTEIVHELLLLPDTNVNTLTRDHKTALDLAEGLPISEEILEIKECLIRYGAVKANDLNQPRDELRKTMTQIKKDVYFQLEQARKTNKNVSGIANELRKLHRAGINNAANSVTVVAVLFAAVAFAAMFTVPGGDNDHGVAVMVQTASFKAFFISNAIALFTSLSVVVVQITIVRGEIKAERRVVEVINKMMWLASVCTSVSFISASYIVVGRRSQWAAILVTIVGAIVMGGVLGTMTYYVVKSKRSRRMRRKKGKFSKTGTHSWRLSISRYLRKRSTENHPSLSKHSLRCLTHDFLLSQIAATSKKKWSLIEL 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01655 614 PANTHER CASKIN 35 568 - -
Gma19g01655 614 ProSiteProfiles Ankyrin repeat profile. 222 254 IPR002110 GO:0005515
Gma19g01655 614 PANTHER ANKYRIN REPEAT-CONTAINING PROTEIN ITN1 35 568 - -
Gma19g01655 614 MobiDBLite consensus disorder prediction 1 15 - -
Gma19g01655 614 Pfam Ankyrin repeats (3 copies) 219 278 IPR002110 GO:0005515
Gma19g01655 614 Pfam Ankyrin repeats (3 copies) 72 177 IPR002110 GO:0005515
Gma19g01655 614 Gene3D - 41 210 IPR036770 -
Gma19g01655 614 MobiDBLite consensus disorder prediction 1 37 - -
Gma19g01655 614 Pfam Domain of unknown function 406 510 IPR026961 -
Gma19g01655 614 Gene3D - 211 372 IPR036770 -
Gma19g01655 614 ProSiteProfiles Ankyrin repeat profile. 154 177 IPR002110 GO:0005515
Gma19g01655 614 ProSiteProfiles Ankyrin repeat region circular profile. 154 177 - -
Gma19g01655 614 ProSiteProfiles Ankyrin repeat profile. 290 323 IPR002110 GO:0005515
Gma19g01655 614 SUPERFAMILY Ankyrin repeat 72 352 IPR036770 -
Gma19g01655 614 SMART ANK_2a 256 285 IPR002110 GO:0005515
Gma19g01655 614 SMART ANK_2a 222 251 IPR002110 GO:0005515
Gma19g01655 614 SMART ANK_2a 67 96 IPR002110 GO:0005515
Gma19g01655 614 SMART ANK_2a 119 148 IPR002110 GO:0005515
Gma19g01655 614 SMART ANK_2a 188 217 IPR002110 GO:0005515
Gma19g01655 614 SMART ANK_2a 290 320 IPR002110 GO:0005515
Gma19g01655 614 SMART ANK_2a 154 183 IPR002110 GO:0005515
Gma19g01655 614 ProSiteProfiles Ankyrin repeat region circular profile. 222 245 - -
Gma19g01655 614 MobiDBLite consensus disorder prediction 17 37 - -
Gma19g01655 614 Pfam Ankyrin repeat 291 319 IPR002110 GO:0005515
Gma19g01655 614 ProSiteProfiles Ankyrin repeat profile. 119 151 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01655 Gma-Chr19 45931012 45937448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01655 22 565 Miscellaneous Gene Families AT3G09550 70.475 0.0 787
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01655 - - gmx:100779710 1016.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01655 19 45931012 45937448 Gma19g01655 19 45931012 45937448 ECH
Gma19g01655 19 45931012 45937448 Gma03g01609 03 42299091 42301882 GST