Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01653 ATGAAAGGCATAGACATCTTCTGTGCATCACAGGCCTCAACAGCTATATGTCTTAGCATGGATCAACCCTCTTCCTCCTATTCCTCTTCTTCATCTTCCATTTCCAACACTGCTCAATTTGGTGGCAGAGCCATTGACCGCCACAACCCCATCATCACAGATCCTAGAAGAACCCCCTCAAGAGACCTCATTTCCCCTAGCTCTTCTTCTCAGTCCCCCATTGAGCCCAAACCTTTGCATGATCATCTCCAAAAGACAAAGAAAAACTCCACTTCCAAGCCAAGTGGTCAGAAGAAGAAGAGTGCTGCAAAGGGTCATGATCAGAAGAAGAAAAGTGCTGCGGGAAAGTTGACCGAACACATCACCAACAATTACTCCTCAAAACCAATTGACAGCATTCTGAGGAGGAGTTGGGCTAGGCCACCTTCTGATTTGATCACTCCTCCTGGTTCTTCAAGATATTTGCTCATTGACACGCCTTCCTTGGACCGCGTATCTTCGGTTTATGATCCTGTTTTGGCTTTAACTGATGTTAATAAGGAGAAAGCACAGGTTATTCATCTTGATCAAACCAAACATTCATCTAAACCCTCTAGCTCCACTCTTCCAAAATCTGATTCCTCAGACCAGGTTGTAGAATTGAGGGTTTCTCTGCACTGCAAAGGTTGTGAAGGGAAGGTGAGGAAACATCTGTCTAGAATGCGAGGAGTTACGTCCTTCAACATAGACTTTGCGGCAAAGAAGGTTACAGTAGTTGGTGATGTGACTCCTTTGAGCGTATTGGCAAGCATATCAAAGCCTATTGCAAAAACCACCACCGCCGACAACTCACGCCACCATCGCACCGTCCAACCCGTTCTTCCCTTCTCCCTTACGACCCTCTCCTACGCACGTCTCTAA 900 0.4633 MKGIDIFCASQASTAICLSMDQPSSSYSSSSSSISNTAQFGGRAIDRHNPIITDPRRTPSRDLISPSSSSQSPIEPKPLHDHLQKTKKNSTSKPSGQKKKSAAKGHDQKKKSAAGKLTEHITNNYSSKPIDSILRRSWARPPSDLITPPGSSRYLLIDTPSLDRVSSVYDPVLALTDVNKEKAQVIHLDQTKHSSKPSSSTLPKSDSSDQVVELRVSLHCKGCEGKVRKHLSRMRGVTSFNIDFAAKKVTVVGDVTPLSVLASISKPIAKTTTADNSRHHRTVQPVLPFSLTTLSYARL 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01653 299 MobiDBLite consensus disorder prediction 60 75 - -
Gma19g01653 299 Gene3D - 207 271 - -
Gma19g01653 299 MobiDBLite consensus disorder prediction 188 207 - -
Gma19g01653 299 Pfam Heavy-metal-associated domain 214 265 IPR006121 GO:0046872
Gma19g01653 299 CDD HMA 213 266 IPR006121 GO:0046872
Gma19g01653 299 MobiDBLite consensus disorder prediction 21 42 - -
Gma19g01653 299 ProSiteProfiles Heavy-metal-associated domain profile. 217 266 IPR006121 GO:0046872
Gma19g01653 299 SUPERFAMILY HMA, heavy metal-associated domain 210 266 IPR036163 GO:0046872
Gma19g01653 299 MobiDBLite consensus disorder prediction 21 123 - -
Gma19g01653 299 MobiDBLite consensus disorder prediction 190 207 - -
Gma19g01653 299 PANTHER OS08G0405700 PROTEIN 1 266 IPR044526 -
Gma19g01653 299 PANTHER COPPER CHAPERONE 1 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01653 Gma-Chr19 45898849 45901552 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01653 - - gmx:100786319 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01653 19 45898849 45901552 Gma03g01606 03 42271881 42274184 GST
Gma19g01653 19 45898849 45901552 Gma10g00428 10 4116977 4118279 PCT
Gma19g01653 19 45898849 45901552 Gma13g01135 13 25510625 25512189 PCT
Gma10g00428 10 4116977 4118279 Gma19g01653 19 45898849 45901552 PCT
Gma13g01135 13 25510625 25512189 Gma19g01653 19 45898849 45901552 PCT