Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01601 ATGGAGAGTGGGGGTAGTTTCAGGATTGGTAGTTCATCCATTTGGAGGGACAGTGACGCGAAGATCTTCTCAAACTCTTACCACCGAGAGAATGATGAAGAGGCTCTCAAATGGGCTACCATTCAGAAACTTCCAACCGTTGTGCGTTTGAGGAAAGGTTTGCTCACTTCACCCGAAGGGGAAGTAAATGAGATTGATGTACAGAAACTTGGGTTTCAGGAAAGGAGAACTTTACTTGATAGACTGGTGAGAACTGTTGAAGATGACAATGAGAAGTTTTTGCTCAAGCTCAAGGAACGTGTTGATAGAGTTGGAATTGATCTTCCTACTATAGAGGTTCGGTTTGAGAACTTGAACATTGCAGCTGAAGCTTGTGTCGGAACTAGACCTTTGCCTACCTTCACTAACTTCACGGTTAATATAGTGCAGGGTCTGTTGAACTCTCTTCTTACACTTCCCAGTAGAAGACAACAGATAAATATTCTCCAGGATGTTAGTGGAATAATAAAGCCTGGCAGAATGGCATTGCTTTTGGGCCCTCCAAGTTCCGGGAAAACCACACTCTTGCTGGCCTTGGCTGCAAAACTTGACCCAAAATTGAAGTTCTCTGGAAAAGTGACTTATAATGGTCATGGAATGAATGAGTTTGTACCCCAAAGAACTGCAGCTTATGTCAATCAAAATGATCTTCACATTGCAGAATTGACAGCCAGAGAAACCTTGGCCTTCTCAGCAAGAGTTCAAGGAGTTGGAACTCGTTATGATTTGCTTGCAGAATTGTCAAGAAGAGAAAAAGAGGCAAATATCAAGCCTGATCCAGATATTGATATCTACATGAAGGCTGTAACAACTGGAGTGCAGAAGGCAAATTTGATAACAGATTATGTCCTAAGGATTTTGGGACTGGAGGTCTGTGCTGATACTATTGTAGGAAATGCAATGTTAAGAGGAATCTCTGGTGGACAAAAGAAACGCCTAACAACAGGAGAGATGCTAGTTGGACCAGTTAAAGCTCTATTCATGGATGAAATATCTACTGGTTTGGATAGCTCAACAACTTTCCAAATTGTGAATTCACTCAAGCAATATGTTCATATTCTGAAAGGAACTGCAGTCATCTCACTCCTCCAGCCAGCACCAGAGACTTACAATCTTTTTGATGACATTATAGTACTCTCTGATAGTCATATTGGGTACCAGGGTCCCCGCGAATACGTGCTGGAATTTTTTGAATCAATGGGTTTTAAATGTCCCGAGAGGAAGGGCGTGGCAGACTTTTTGCAAGAGGTAACATCATGGAAGGATCAGGAGCAGTACTGGGCAGACAAAGATCAGCCTTATAGATTTGTCACATCCAAAGAGTTCTCAGAGGCACATAGATCATTTCATGTTGGAAGAAGCCTTGGTGAAGAACTTGCTACTGAATTTGACAAATCTAAGAGCCATCCGGCTGCTTTGACAACCAAAAGATATGGAGTGGGGAAATGGGAACTGCTAAAAGCTTGTTTATCAAGAGAATATTTACTTATGAAGCGCAATTCATTTTATTACACCTTCAAGCTTAGCAAACTTGCTGTAATGGCATTTATTACCATGACCATTTTCCTCCGGACCGAGATGCACAGAGACTCAGTGACTGATGGCGGCATATATGTGGGTGCAATGTTTTATGGCATTGTTACAGTTATGTTCAACGGACTGGCTGAAATTTCCGTGATCGTTTCAAGGCTTCCTGTTTTCTACAAGCAAAGGGATAATATATTTTTTCCTTCGTGGGCATATGCACTTCCAGAATGGATCCTAAAAATCCCCATGAGTTTTGCGGAAGTGGGTGTTTGGGTGTTCCTCACCTACTATGTCATTGGATTTGATCCATATATTGAAAGATTTTTTAGGCAATACCTTGTTCTTGTACTATTAAACCAGATGACTTCTGCATTATTTCGATTTATCGCTGCACTTGGGAGGGAACCGACAGTGGCTACAACACTTGCATGGCTTACGCTGGCCATCCTTTATTCTATAAGTGGTTTTGTCCTATCAAAAGGTATCGAGAATACAAACAATCCCAGTCCTTCTCCCATTATGTTCTGGACTAACAATGCTCCTTCATTTATTCCCTTAATGCCCACAGACAAAATAAAAAAATGGTGGCTATGGGGATTCTGGATATCACCTATGATGTATGGACAGAATGCTATGGTAAATAATGAGTTCCTTGGAAAGAGATGGAGACATATTTTACCTGACTCAACAGAGCCTCTTGGTGTTGAAGTTTTGAAATCTTGGGGATTCTTCACCCAGTCACACTGGTACTGGATCGGTGTTGGAGCTTTGATTGGATATACATTACTTTTCAACTTTGGCTACATCCTCGCTCTCATGTACTTGAGTCCACCTGGGAAGCACCAGGCTGTTATATCAGAGGAAGCTCAAAGCAATGACCAGAATGGTGGTAGTGAAAAAGGAACTAATGTTCCGAGGCGCATAAAACATAGTTTTTCTTATCATTCAATTATGAGAAAATTCGGAAGTGCAAGTGGAAGCACATCTTCTCATACTTTACCTGCTAGAGGAATAGTTCTTCCTTTCCAGCCTCATTCTATCACCTTTGATGAAGTAACATATGATGTGGATATGCCACAGGAAATGAGGAAGCGAGGTGTTGTTGAGGATAAATTGGTTATTCTGAAGGGTGTCAGTGGAGCTTTCAGGCCAGGTGTTCTTACTGCTCTAATGGGTATCACTGGTGCAGGCAAAACAACGCTGTTGGATGTACTTGCTGGTAGAAAAACTGGAGGATATGTTGGAGGGAACATCACAATCTCTGGGTATCAGAAGAAGCAAGAAACATTTCCAAGGATTTCTGGATACTGTGAGCAAAATGACATACACTCTCCTCATGTTACTGTGTATGAATCCTTGCTCTATTCAGCTTGGCTCCGTTTGTCCCCAGATATAAATACTGAAACCAAAAGGATGTTCATTGAGGAAGTCATGGAACTTGTGGAATTGAAACCACTAAGGCATGCATTAGTCGGATTGCCTGGTGTGAATGGTCTCTCAACAGAGCAACGCAAAAGATTGACTATTGCAGTTGAACTTGTTGCAAATCCTTCCATAATATTCATGGATGAGCCAACTTCTGGGCTAGATGCAAGAGCTGCTGCTATTGTCATGAGAACAGTTAGGAATACAGTAGACACTGGAAGAACAGTTGTTTGTACCATCCATCAGCCTAGCATAGATATATTTGAATCTTTTGATGAGCTTTTGCTAATGAAGCAAGGAGGGCAAGAGATATATGTGGGGCCACTTGGACATCATTCTTCCCATTTAATTAGTTACTTTGAGGGAATCAAAGGTGTCAATAGGATTAAAGATGGCTATAATCCGGCAACATGGATGTTGGAAGTCTCGACTTCAGCAAAAGAAATGGAATTGGGGGTTGATTTTGCTGAGGTGTACAAAAATTCAGAGTTATACAGGAGAAACAAAGCACTTATTAAAGAACTGAGTACTCCAGCTCCTGGTTCAAAAGACCTTTATTTTCCTTCACAGTACTCAACCTCCTTTCTCACTCAATGCATGGCTTGCTTATGGAAACAACATTGGTCTTACTGGCGCAATCCTCTATACACTGCTATAAGATTTCTTTACTCCACTGCTGTAGCCGCTGTACTTGGTAGCATGTTCTGGAACCTTGGCTCCAAAATTGACAAACAACAAGATCTTTTTAATGCCATGGGCTCCATGTATGCCGCTGTTCTCCTTATTGGCATTAAGAATGCCAATGCAGTGCAGCCAGTGGTTGCTGTTGAGCGAACAGTCTTTTATAGAGAAAAAGCAGCCGGAATGTATTCAGCTTTACCATATGCTTTTGCTCAGGTTCTAATTGAGCTCCCATATGTTCTAGTACAAGCTGTGGTATATGGCATTATAATTTATGACATGATCGGATTTGAGTGGACTATAACTAAAGTTTTCTGGTACCTATTCTTCATGTACTTCACCTTCCTGACCTTCACCTATTATGGCATGATGTCAGTAGCCGTAACCCCAAACCAACACATTTCCTCTATAGTTTCTTCTGCATTCTATGCAGTGTGGAATCTCTTCTCAGGATTCATAGTCCCTCGACCGAGAATCCCAGTGTGGTGGAGATGGTACAGTTGGGCAAATCCTGTAGCTTGGAGTTTGTATGGATTGGTGGCTTCACAATATGGAGATATACAACAAAGCATGGAATCCAGTGACGGGAGAACGACAGTGGAAGGCTTTGTAAGAAGCTACTTTGGTTTCAAGCACGATTTTCTGGGAGTGGTTGCtgttggttaa 4338 0.4161 MESGGSFRIGSSSIWRDSDAKIFSNSYHRENDEEALKWATIQKLPTVVRLRKGLLTSPEGEVNEIDVQKLGFQERRTLLDRLVRTVEDDNEKFLLKLKERVDRVGIDLPTIEVRFENLNIAAEACVGTRPLPTFTNFTVNIVQGLLNSLLTLPSRRQQINILQDVSGIIKPGRMALLLGPPSSGKTTLLLALAAKLDPKLKFSGKVTYNGHGMNEFVPQRTAAYVNQNDLHIAELTARETLAFSARVQGVGTRYDLLAELSRREKEANIKPDPDIDIYMKAVTTGVQKANLITDYVLRILGLEVCADTIVGNAMLRGISGGQKKRLTTGEMLVGPVKALFMDEISTGLDSSTTFQIVNSLKQYVHILKGTAVISLLQPAPETYNLFDDIIVLSDSHIGYQGPREYVLEFFESMGFKCPERKGVADFLQEVTSWKDQEQYWADKDQPYRFVTSKEFSEAHRSFHVGRSLGEELATEFDKSKSHPAALTTKRYGVGKWELLKACLSREYLLMKRNSFYYTFKLSKLAVMAFITMTIFLRTEMHRDSVTDGGIYVGAMFYGIVTVMFNGLAEISVIVSRLPVFYKQRDNIFFPSWAYALPEWILKIPMSFAEVGVWVFLTYYVIGFDPYIERFFRQYLVLVLLNQMTSALFRFIAALGREPTVATTLAWLTLAILYSISGFVLSKGIENTNNPSPSPIMFWTNNAPSFIPLMPTDKIKKWWLWGFWISPMMYGQNAMVNNEFLGKRWRHILPDSTEPLGVEVLKSWGFFTQSHWYWIGVGALIGYTLLFNFGYILALMYLSPPGKHQAVISEEAQSNDQNGGSEKGTNVPRRIKHSFSYHSIMRKFGSASGSTSSHTLPARGIVLPFQPHSITFDEVTYDVDMPQEMRKRGVVEDKLVILKGVSGAFRPGVLTALMGITGAGKTTLLDVLAGRKTGGYVGGNITISGYQKKQETFPRISGYCEQNDIHSPHVTVYESLLYSAWLRLSPDINTETKRMFIEEVMELVELKPLRHALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELLLMKQGGQEIYVGPLGHHSSHLISYFEGIKGVNRIKDGYNPATWMLEVSTSAKEMELGVDFAEVYKNSELYRRNKALIKELSTPAPGSKDLYFPSQYSTSFLTQCMACLWKQHWSYWRNPLYTAIRFLYSTAVAAVLGSMFWNLGSKIDKQQDLFNAMGSMYAAVLLIGIKNANAVQPVVAVERTVFYREKAAGMYSALPYAFAQVLIELPYVLVQAVVYGIIIYDMIGFEWTITKVFWYLFFMYFTFLTFTYYGMMSVAVTPNQHISSIVSSAFYAVWNLFSGFIVPRPRIPVWWRWYSWANPVAWSLYGLVASQYGDIQQSMESSDGRTTVEGFVRSYFGFKHDFLGVVAVG 1445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01601 1445 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 869 1121 IPR003439 GO:0005524
Gma19g01601 1445 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 891 1105 IPR027417 -
Gma19g01601 1445 Pfam ABC-transporter N-terminal 86 137 IPR029481 -
Gma19g01601 1445 MobiDBLite consensus disorder prediction 807 823 - -
Gma19g01601 1445 Pfam Plant PDR ABC transporter associated 744 807 IPR013581 -
Gma19g01601 1445 Pfam ABC transporter 897 1049 IPR003439 GO:0005524
Gma19g01601 1445 Pfam ABC transporter 162 344 IPR003439 GO:0005524
Gma19g01601 1445 CDD ABCG_PDR_domain2 866 1104 IPR034003 -
Gma19g01601 1445 PANTHER ATP-BINDING CASSETTE TRANSPORTER 2 683 - -
Gma19g01601 1445 PANTHER ATP-BINDING CASSETTE TRANSPORTER 710 1444 - -
Gma19g01601 1445 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 2 683 - -
Gma19g01601 1445 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 710 1444 - -
Gma19g01601 1445 Gene3D - 882 1112 IPR027417 -
Gma19g01601 1445 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 419 IPR027417 -
Gma19g01601 1445 MobiDBLite consensus disorder prediction 807 826 - -
Gma19g01601 1445 Pfam ABC-2 type transporter 1194 1408 IPR013525 GO:0016020|GO:0140359
Gma19g01601 1445 Pfam ABC-2 type transporter 498 681 IPR013525 GO:0016020|GO:0140359
Gma19g01601 1445 Gene3D - 148 461 IPR027417 -
Gma19g01601 1445 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 147 419 IPR003439 GO:0005524
Gma19g01601 1445 SMART AAA_5 906 1098 IPR003593 -
Gma19g01601 1445 SMART AAA_5 171 396 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01601 Gma-Chr19 45379542 45398793 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01601 K08711 - gmx:732607 2455.25