Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01580 ATGGCAGTGATAGAAGAAAAAGGCCCTTCAAGTGGGAACGAGGATTACACTCAAGATGGCACAGTGGACCTAAAGGGTAGACCCGTTTTGAGATCAAAGACGGGAAAATGGAAAGCTTGTTCCTTCATAGTAGGGTATGAAGTGTTTGAGAGGATGGCCTTCTACGGGATACAATCAAACCTAGTGATATATCTAACTAATAAGCTCCATGAGGGCACTGTGACAGCTTCAAACAACGTTAGCAACTGGGTGGGTGCAGTGTGGATGATGCCACTGGCAGGAGCTTACATAGCCGATGCCCATCTTGGCCGATATAAGACCTTTGTAATTGCGTCATGCATCTATATTCTGGGAATGTGTCTGTTGACTCTAGCAGTTTCACTACCAGCTCTGAGGCCATCACCATGTGACCAAGGCCAGAATTGCCCACGGGCATCGTCATTGCAGTATGGTATTTTCTTCTTGGCCCTTTACATCGTTGCAATAGGCACAGGGGGAACCAAGCCCAACATTTCTACCATGGGAGCTGACCAATTTGATGAGTTTGAGCCCAAAGAGAGATCCCACAAGCTTTCCTTCTTCAATTGGTGGTTCTTTAGTATTTTCTTTGGTACCCTTTTCTCCAACACTTTCTTGGTATACTTACAAGACAATAAGGGTTGGGCCATTGGGTATGGCCTTCCCACCCTTGGGCTTGTTATTTCAGTAGTGGTGTTTCTGGTAGGAACTCCATTTTATAGACACAAATTGCCATCAGGTAGCCCAGTAACAAGGATGCTTCAGGTATATGTTGCTGCTGGGAGCAACTGGAAGCTGCATGTCCCAGACGATCCGAAAGAGCTACATGAGCTGAGCATTGAAGAGTATGCAAGTAATGGGAGAAACAGAATTGATCGGAGCTCCTCATTGAGTTTCCTTGACAAAGCAGCTATAAAGACTGGCCAAACATCACCATGGATGCTTTGCACAGTGACCCAAGTAGAGGAAACCAAGCAAATGACAAAACTGATTCCTCTCTTGCTTACAACGATTATTCCAAGCACCTTGGTAGTTCAAGCGAGCACACTCTTTGTCAAACAAGGCACCACACTAGACAGGAGTATGGGACCCCATTTCCAAATCCCCCCGGCATGTCTCAACGCATTTGTTACCATCTCCATGCTGATAACCATCGTTGTCTACGACCGAGCTTTCGTTCCCGCTATCCGGCGCTACACGAAGAACCCCAGAGGGATCACAATGCTGCAGAGACTCGGCATTGGACTTGTGATGCATGTCTTCATAATGATCATTGCATGCTTTGCTGAAAGAAGGAGACTCAAGGTTGCAAGAGAAAACCACCTCTTTGGTCTGCATGATACAATTCCTCTCACTATTTTCATCCTCTTACCTCAGTATGCTTTGGGAGGGGTTGCTGATAACTTTGTTGAAGTTGCCAAGATAGAGATATTCTATGATCAAGCACCAGATGGCATGAAAAGTCTTGGAACAGCATATTTCACGACCACCTTAGGTATTGGAAGTTTTCTCAGCAGTTTTCTTCTGTCAACTGTTGCTGATGTCACCAAGAGACATGGCCACAATGGTTGGATTTTGAATAATCTAAACGTCTCCCGTTTAGATTATTATTATGCTTTCATGGCTGTACTTAGCTTTCTCAACTTTCTCTGCTTTTTGGTTGTTGCCAAGTTCTTTGTCTATAATGTTGATGTTACACAAACCAAATCCGGCTCGGAGATTAACCCCTCTTCATCACAGGAACAGGACAATACTGGAATAAGCCCAAGTATCCCACAACCAGATGGCAAATCCTAG 1815 0.449 MAVIEEKGPSSGNEDYTQDGTVDLKGRPVLRSKTGKWKACSFIVGYEVFERMAFYGIQSNLVIYLTNKLHEGTVTASNNVSNWVGAVWMMPLAGAYIADAHLGRYKTFVIASCIYILGMCLLTLAVSLPALRPSPCDQGQNCPRASSLQYGIFFLALYIVAIGTGGTKPNISTMGADQFDEFEPKERSHKLSFFNWWFFSIFFGTLFSNTFLVYLQDNKGWAIGYGLPTLGLVISVVVFLVGTPFYRHKLPSGSPVTRMLQVYVAAGSNWKLHVPDDPKELHELSIEEYASNGRNRIDRSSSLSFLDKAAIKTGQTSPWMLCTVTQVEETKQMTKLIPLLLTTIIPSTLVVQASTLFVKQGTTLDRSMGPHFQIPPACLNAFVTISMLITIVVYDRAFVPAIRRYTKNPRGITMLQRLGIGLVMHVFIMIIACFAERRRLKVARENHLFGLHDTIPLTIFILLPQYALGGVADNFVEVAKIEIFYDQAPDGMKSLGTAYFTTTLGIGSFLSSFLLSTVADVTKRHGHNGWILNNLNVSRLDYYYAFMAVLSFLNFLCFLVVAKFFVYNVDVTQTKSGSEINPSSSQEQDNTGISPSIPQPDGKS 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01580 604 PANTHER PROTEIN NRT1/ PTR FAMILY 5.2-LIKE 19 578 - -
Gma19g01580 604 MobiDBLite consensus disorder prediction 1 20 - -
Gma19g01580 604 SUPERFAMILY MFS general substrate transporter 27 562 IPR036259 -
Gma19g01580 604 Pfam POT family 105 531 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma19g01580 604 MobiDBLite consensus disorder prediction 575 598 - -
Gma19g01580 604 MobiDBLite consensus disorder prediction 575 604 - -
Gma19g01580 604 CDD MFS_NPF5 37 567 IPR044739 GO:0042937|GO:0042938|GO:0071916
Gma19g01580 604 Gene3D MFS general substrate transporter like domains 9 573 IPR036259 -
Gma19g01580 604 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 19 578 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01580 Gma-Chr19 45207336 45210936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01580 4 583 Organic Solute Cotransporters AT5G46040 59.658 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01580 - - gmx:100807002 1192.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01580 19 45207336 45210936 Gma19g01580 19 45207336 45210936 ECH
Gma19g01580 19 45207336 45210936 Gma03g01526 03 41510886 41514076 GST